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The map label for this gene is 226950091

Identifier: 226950091

GI number: 226950091

Start: 3042459

End: 3043526

Strand: Reverse

Name: 226950091

Synonym: CLM_3044

Alternate gene names: NA

Gene position: 3043526-3042459 (Counterclockwise)

Preceding gene: 226950092

Following gene: 226950090

Centisome position: 73.24

GC content: 28.84

Gene sequence:

>1068_bases
ATGGAAGGAATAATGGAGTCTATAAAAAATTCTAAGGATGCATTTATAATTGCTGAAATAGGAGTTAATTATTATGATAT
AGCTAAAAAAGAAAGTATAACTGTATTAGAGGCTGCAAAGTTAATGATAAAAGAAGCTAAAAATGCTGGTGCACAGGCTG
CAAAGTTTCAGACTTATAAAGCTGGAAAAATAGCATCTAAAAAAGCACCTGCTTATTGGGATACTACTGAAGAAAACACA
AAATCCCAATATGAATTATTTACTAAGTTCGATAAATTTGGTGAAAGTGAATATGCTGAATTAGCTAAGTACTGCGAAGA
GATAGGCATAATGTTTATGTCCACTCCTTTTGATTTTGAATCAGCAGATTATCTAAATGATTTAATGGCTATATATAAAA
TATCTTCTTCAGATTTAACTAATTTACCATTTATCGAGCATATCGCAAAAAAAGGAAAACCTGTATTTATATCTACAGGT
GCTGCTACTATAGGAGAGATAGAAGCTGCAATAAATACTATATTATCAACAGGAAATAAAGAAATATGTATAATGCATTG
CGTATTAGACTATCCCACTAAATATGAAAATGCTAATTTAAACATGATAAAGCATTTGAAAGAAGTATTTCCAGGATATA
TGTTAGGATATTCAGATCATACTAAACCAGATAAAAATATGTTAGTTTTAACTAAAGCTTATGAATATGGAGCTAAGGTT
ATAGAAAAACATTTTACATTAGATAAAACTTTAATTGGGAATGATCATTATCATGCTATGGATCCCAGCGATTTAGAAAC
ATTTAAGCATAATTTATACATGTTAAGTTTAATAGAAGGAGAATATTGTAAAAGACCTTTAGAATGTGAAAATTCTTCAA
GAAAACAAGCAAGAAGAAGTTTAATTGCTAAGCAGGAAATAAAAAAGGGTGAAGTTGTAACTAAAGACATGATAACTTTT
AAAAGACCAGGTACAGGAATATCTCCAATAGATTTAGATAGGATATTAGGTAGACAAGTAAAAGTTAATATAGAAGAGGA
TACCATATTAACTTGGGAATTATTTTAA

Upstream 100 bases:

>100_bases
GATTCAAAAATATTTTTGATCTAGCTAAAGAAGAGTATAGTAAATTTAAATTAAACTTTAATATATAAAAATTAAGTTTT
AGATAAAAGGAGATTATATA

Downstream 100 bases:

>100_bases
TTATTATTTTAAAAGAGGATGATTAACTATGAAAATATTAGTTACTGGTGGAGCAGGGTTTATAGCATCGAATTTAGTAG
ATAAACTTATAAGCATGGGA

Product: neuB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYKAGKIASKKAPAYWDTTEENT
KSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFESADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTG
AATIGEIEAAINTILSTGNKEICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
IEKHFTLDKTLIGNDHYHAMDPSDLETFKHNLYMLSLIEGEYCKRPLECENSSRKQARRSLIAKQEIKKGEVVTKDMITF
KRPGTGISPIDLDRILGRQVKVNIEEDTILTWELF

Sequences:

>Translated_355_residues
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYKAGKIASKKAPAYWDTTEENT
KSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFESADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTG
AATIGEIEAAINTILSTGNKEICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
IEKHFTLDKTLIGNDHYHAMDPSDLETFKHNLYMLSLIEGEYCKRPLECENSSRKQARRSLIAKQEIKKGEVVTKDMITF
KRPGTGISPIDLDRILGRQVKVNIEEDTILTWELF
>Mature_355_residues
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYKAGKIASKKAPAYWDTTEENT
KSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFESADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTG
AATIGEIEAAINTILSTGNKEICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
IEKHFTLDKTLIGNDHYHAMDPSDLETFKHNLYMLSLIEGEYCKRPLECENSSRKQARRSLIAKQEIKKGEVVTKDMITF
KRPGTGISPIDLDRILGRQVKVNIEEDTILTWELF

Specific function: Unknown

COG id: COG2089

COG function: function code M; Sialic acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spsE [H]

Homologues:

Organism=Homo sapiens, GI12056473, Length=350, Percent_Identity=32, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI21357081, Length=358, Percent_Identity=27.3743016759777, Blast_Score=147, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006190
- InterPro:   IPR013785
- InterPro:   IPR013132
- InterPro:   IPR013974 [H]

Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 40262; Mature: 40262

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50844 AFP_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYK
CCHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCC
AGKIASKKAPAYWDTTEENTKSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCC
SADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTGAATIGEIEAAINTILSTGNK
HHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
EICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
CEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECHHHHHHH
IEKHFTLDKTLIGNDHYHAMDPSDLETFKHNLYMLSLIEGEYCKRPLECENSSRKQARRS
HHHHHHHCCEEECCCCCCCCCCHHHHHHHHCEEEEEEECCHHCCCCCCCCCCHHHHHHHH
LIAKQEIKKGEVVTKDMITFKRPGTGISPIDLDRILGRQVKVNIEEDTILTWELF
HHHHHHHHCCCCCHHHHHEEECCCCCCCCCCHHHHCCCEEEEEECCCEEEEEEEC
>Mature Secondary Structure
MEGIMESIKNSKDAFIIAEIGVNYYDIAKKESITVLEAAKLMIKEAKNAGAQAAKFQTYK
CCHHHHHHCCCCCEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCC
AGKIASKKAPAYWDTTEENTKSQYELFTKFDKFGESEYAELAKYCEEIGIMFMSTPFDFE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCCC
SADYLNDLMAIYKISSSDLTNLPFIEHIAKKGKPVFISTGAATIGEIEAAINTILSTGNK
HHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
EICIMHCVLDYPTKYENANLNMIKHLKEVFPGYMLGYSDHTKPDKNMLVLTKAYEYGAKV
CEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECHHHHHHH
IEKHFTLDKTLIGNDHYHAMDPSDLETFKHNLYMLSLIEGEYCKRPLECENSSRKQARRS
HHHHHHHCCEEECCCCCCCCCCHHHHHHHHCEEEEEEECCHHCCCCCCCCCCHHHHHHHH
LIAKQEIKKGEVVTKDMITFKRPGTGISPIDLDRILGRQVKVNIEEDTILTWELF
HHHHHHHHCCCCCHHHHHEEECCCCCCCCCCHHHHCCCEEEEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]