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The map label for this gene is flgD [C]

Identifier: 226950069

GI number: 226950069

Start: 3021080

End: 3021901

Strand: Reverse

Name: flgD [C]

Synonym: CLM_3022

Alternate gene names: 226950069

Gene position: 3021901-3021080 (Counterclockwise)

Preceding gene: 226950070

Following gene: 226950068

Centisome position: 72.72

GC content: 31.63

Gene sequence:

>822_bases
ATGCCAACAGCAATTAATTCAAACTATTCCCCTTATACCGGTAAAACCAATAAAACTAGTGATGAGAATAAAAAAGAAGC
GGATAAAAAAGAAGATGAAAAAGGAATAATAGAGAGGATACAGGAAAACACTGGTATTAAAACTGATAGAGGTACTAGAA
TTGTTAAAAAGGGACAGGACCTTGATAAAAATGCTTTTTTTAAGATATTAGCTGCGGAACTTGCTAATCAAGATCCTACT
AATGCAAAGGATGGGACAGAATATGTATCCCAATTAGCGCAATTTTCATCTTTGGAGCAAATGGCTAATTTAAATAGCAT
GATGAAGTTAACAGGAGCTTCTAATTTTATAGGTAAAGTGGTTTTACTTAGAAGGTTTGATGAGCAGGGGAATCAATATG
CAGGAATAGTAAGAAATGTAATCAAAAATGGTGATGAAATTAAATTAAGTATAGAGTATGCTCCAGGGAAAGTAGGAGAA
TTTGCCATGGAGGATGTATTAAATATTACAGATGATATAAACGAAAACTCTAAGTATAATAATGATTTATTAAATGCAGT
AAACTTAATAGGAAAAAATGTACTAATGGATGATGGAAAAGAAAAATTATCTGGTGTGGTAAAAGGTGTAGTTAGAAATG
GTTTAGGAGTAAGTATTAAAGTTACCATAACAAAAGATGGAAAAGCACAAGATGTATATGTGCCGTTTGAATATGTAACA
AATGTTCAAGAAGATGGTGACTTTGGTAATATTGAAAATCCAGATGAAAAACCTTCTGAAGGAGGAGAAGAAAATAAACC
TGAGGTAGAAGAAAAGAAATAA

Upstream 100 bases:

>100_bases
CATCTATGGATGAAATACCAGAAGAAGAAAATATAAGCACTATAGATGGGAATGTAAATATCTTAGCTTAATATAAAAAA
ATGGAATGGAGGTGTAATAT

Downstream 100 bases:

>100_bases
GGATGTGGAAAAATATGTCATTTAAAATTATAAATGGTAAATTACATTTAATAGAAGATTATAATTATGCATCCTTAAAA
AATAAAAATATTAAAAGTGA

Product: flagellar hook capping protein

Products: NA

Alternate protein names: Flagellar Hook Capping Protein; Basal-Body Rod Protein FlgD; Basal-Body Rod Protein; Flagellar Hook Protein FlgD; Flagellar Hook Assembly Protein

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERIQENTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPT
NAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKVVLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGE
FAMEDVLNITDDINENSKYNNDLLNAVNLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIKVTITKDGKAQDVYVPFEYVT
NVQEDGDFGNIENPDEKPSEGGEENKPEVEEKK

Sequences:

>Translated_273_residues
MPTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERIQENTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPT
NAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKVVLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGE
FAMEDVLNITDDINENSKYNNDLLNAVNLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIKVTITKDGKAQDVYVPFEYVT
NVQEDGDFGNIENPDEKPSEGGEENKPEVEEKK
>Mature_272_residues
PTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERIQENTGIKTDRGTRIVKKGQDLDKNAFFKILAAELANQDPTN
AKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKVVLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGEF
AMEDVLNITDDINENSKYNNDLLNAVNLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIKVTITKDGKAQDVYVPFEYVTN
VQEDGDFGNIENPDEKPSEGGEENKPEVEEKK

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30165; Mature: 30034

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERIQENTGIKTDRGTRIVKKGQD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
LDKNAFFKILAAELANQDPTNAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKV
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGEFAMEDVLNITDDINENSKYN
HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHH
NDLLNAVNLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIKVTITKDGKAQDVYVPFEYVT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHH
NVQEDGDFGNIENPDEKPSEGGEENKPEVEEKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTAINSNYSPYTGKTNKTSDENKKEADKKEDEKGIIERIQENTGIKTDRGTRIVKKGQD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
LDKNAFFKILAAELANQDPTNAKDGTEYVSQLAQFSSLEQMANLNSMMKLTGASNFIGKV
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
VLLRRFDEQGNQYAGIVRNVIKNGDEIKLSIEYAPGKVGEFAMEDVLNITDDINENSKYN
HHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHH
NDLLNAVNLIGKNVLMDDGKEKLSGVVKGVVRNGLGVSIKVTITKDGKAQDVYVPFEYVT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECHHHHH
NVQEDGDFGNIENPDEKPSEGGEENKPEVEEKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA