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The map label for this gene is motB [H]

Identifier: 226950064

GI number: 226950064

Start: 3017570

End: 3018313

Strand: Reverse

Name: motB [H]

Synonym: CLM_3017

Alternate gene names: 226950064

Gene position: 3018313-3017570 (Counterclockwise)

Preceding gene: 226950065

Following gene: 226950063

Centisome position: 72.64

GC content: 33.2

Gene sequence:

>744_bases
ATGGCTAGGAGAAATAAAAAAGGTGGTGGAGGAGACGAAATAAGAGGTGATGAATGGCTTGCAACCTTTTCTGACACCAT
AACTCTATTATTAACTTTCTTTATATTACTTTATTCTTTTTCTAGTGTAGACGCTCAAAAGTTTCAACAGGTGGCCTCTG
CTATGCAGGTAGCCATGACAGGCCAATCTGGAGACAGTATTGTAGATTATAATATGAAAAATGGGGATATACCTTTAGTA
GGAGAAACAACTAAACTTGGAAGAGAAACAGGTTCCGATGCAAAGGATGTATATAAGGAAGTAAATAAATTTGTAGATAA
AAATAATCTTAAATCTTCTGTGGAAGTAAAAGAAGATGGTAGGGGAATCATAATACAGCTTAGAGACAATGTGCTTTTTG
AAATAGGTAGAGCTGATATTAAGCCACAAAGTAAACAAATAATGGATAAAATAAATGATTTAATAGCCACACTGCCAAAT
GAGGTAATTATAGAGGGACATACAGATAATGTACCTATTAAGAATGAAGTATATGGTTCAAATTGGGAGTTATCTACAGC
TAGGGCAGTTAATGTTTTAAGATATTTTGTTGAAACTAAGAAACAAAATCCAGTAAGATTTACCGCAGCAGGATATGGAG
AATATAGACCAATAGCACAAAATAATTCCGATGCTAACAGATCAAAGAATAGAAGGGTAAATATAGTTATAGTTTCAAAA
GAAAAGGAGAGTAGTAAAAAATGA

Upstream 100 bases:

>100_bases
AACCCAAGAATAATGGAAGAAAAGCTAGTTAGTTATCTTTCACCAACAGAAAGATTAGCTTATAGTAAAGTACAAGTATC
TGGGGAAGGAGTAGCTCAAA

Downstream 100 bases:

>100_bases
GCGAGAAAAATGTAGAGACAAAAGGTGAAAGCTTTAAAAAAATAATAATAATAGTTCTTGTGTTAGTTATAGTTGGAGCA
GGAGCTTTTGGAGGGTATAT

Product: chemotaxis motB protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MARRNKKGGGGDEIRGDEWLATFSDTITLLLTFFILLYSFSSVDAQKFQQVASAMQVAMTGQSGDSIVDYNMKNGDIPLV
GETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINDLIATLPN
EVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSK
EKESSKK

Sequences:

>Translated_247_residues
MARRNKKGGGGDEIRGDEWLATFSDTITLLLTFFILLYSFSSVDAQKFQQVASAMQVAMTGQSGDSIVDYNMKNGDIPLV
GETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINDLIATLPN
EVIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSK
EKESSKK
>Mature_246_residues
ARRNKKGGGGDEIRGDEWLATFSDTITLLLTFFILLYSFSSVDAQKFQQVASAMQVAMTGQSGDSIVDYNMKNGDIPLVG
ETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINDLIATLPNE
VIIEGHTDNVPIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSKE
KESSKK

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=269, Percent_Identity=23.0483271375465, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 27616; Mature: 27484

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRNKKGGGGDEIRGDEWLATFSDTITLLLTFFILLYSFSSVDAQKFQQVASAMQVAMT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GQSGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDG
CCCCCCEEEECCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC
RGIIIQLRDNVLFEIGRADIKPQSKQIMDKINDLIATLPNEVIIEGHTDNVPIKNEVYGS
CEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
NWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSK
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
EKESSKK
CCCCCCC
>Mature Secondary Structure 
ARRNKKGGGGDEIRGDEWLATFSDTITLLLTFFILLYSFSSVDAQKFQQVASAMQVAMT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GQSGDSIVDYNMKNGDIPLVGETTKLGRETGSDAKDVYKEVNKFVDKNNLKSSVEVKEDG
CCCCCCEEEECCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC
RGIIIQLRDNVLFEIGRADIKPQSKQIMDKINDLIATLPNEVIIEGHTDNVPIKNEVYGS
CEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
NWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNRRVNIVIVSK
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEC
EKESSKK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]