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The map label for this gene is fliP [H]

Identifier: 226950061

GI number: 226950061

Start: 3015812

End: 3016588

Strand: Reverse

Name: fliP [H]

Synonym: CLM_3014

Alternate gene names: 226950061

Gene position: 3016588-3015812 (Counterclockwise)

Preceding gene: 226950062

Following gene: 226950060

Centisome position: 72.6

GC content: 31.4

Gene sequence:

>777_bases
ATGAAGAAAAGAAATAACAGAATGATGTTTATGGTTTTACTAGCTTTAGGTATAGTGTTTTTTTATTCCATGAAAGCCTA
TGCAGCACCACAAAATACCATGCCTATACCCAAAATAAATATTTCTGTAGATAATGCTAATAATCCCACGGAGTATGTAG
ATAATATAAAGCTGTTAATAATGTTAACTGTATTAACATTACTGCCATCTTTTATAGTAATGATGACAAGCTTTGTAAGA
ACAATTGTGGTATTTGGATTTTTAAGAAATGCTATGGGAACACAACAATCTCCACCTAATCAGGTAATGATTGGTCTTGC
ACTTTTTTTAACTTTATTTATAATGCAACCGGTATATAGCGAAATAAATACTAAGGCTATACAACCATATATGAAAAATA
AAATTACTCAAGAACAGGCAGTAGAAATAGGGGCCAAGCCTCTTAGACAATTTATGCTAAAGCAAACAAGGCAAAAGGAT
TTAAAATTGTTTGTGGAGCTGGCAAAGCCTAATTTTAAAGTAACAAAGGATAATGCACCTTTATATATAGTGGTACCTGC
CTTTATAATAAGTGAGCTTAAAACAGCTTTTCAAATAGGATTTTTATTATTTATTCCATTTTTAATTATAGATTTAGTAG
TAGCTAGTGTACTTATGTCTATGGGTATGTTTATGTTACCACCGGTCATGATATCTCTACCCTTTAAGCTTTTGTTGTTT
GTAATGGTAGACGGATGGTACCTTCTGGTGAAATCTTTAGTAATGAGTTTTGGTTAG

Upstream 100 bases:

>100_bases
ATGCCACAGTATAATGATTTAAAGAAATTCTTAGAAAAAAAAGAACTAAATAAAATTTATGATAAACTTAAGTTAAATAA
GCTAAAAAAGGAAGATAAAT

Downstream 100 bases:

>100_bases
GGGTGACTTAAATGAGCGAAAATATGGTTATGGGTATTATAAAAGATGCTATTCAAACAGGTCTTTTAATATCTGCTCCT
ATTTTGACAATATCTATATT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKKRNNRMMFMVLLALGIVFFYSMKAYAAPQNTMPIPKINISVDNANNPTEYVDNIKLLIMLTVLTLLPSFIVMMTSFVR
TIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINTKAIQPYMKNKITQEQAVEIGAKPLRQFMLKQTRQKD
LKLFVELAKPNFKVTKDNAPLYIVVPAFIISELKTAFQIGFLLFIPFLIIDLVVASVLMSMGMFMLPPVMISLPFKLLLF
VMVDGWYLLVKSLVMSFG

Sequences:

>Translated_258_residues
MKKRNNRMMFMVLLALGIVFFYSMKAYAAPQNTMPIPKINISVDNANNPTEYVDNIKLLIMLTVLTLLPSFIVMMTSFVR
TIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINTKAIQPYMKNKITQEQAVEIGAKPLRQFMLKQTRQKD
LKLFVELAKPNFKVTKDNAPLYIVVPAFIISELKTAFQIGFLLFIPFLIIDLVVASVLMSMGMFMLPPVMISLPFKLLLF
VMVDGWYLLVKSLVMSFG
>Mature_258_residues
MKKRNNRMMFMVLLALGIVFFYSMKAYAAPQNTMPIPKINISVDNANNPTEYVDNIKLLIMLTVLTLLPSFIVMMTSFVR
TIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYSEINTKAIQPYMKNKITQEQAVEIGAKPLRQFMLKQTRQKD
LKLFVELAKPNFKVTKDNAPLYIVVPAFIISELKTAFQIGFLLFIPFLIIDLVVASVLMSMGMFMLPPVMISLPFKLLLF
VMVDGWYLLVKSLVMSFG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=202, Percent_Identity=58.4158415841584, Blast_Score=243, Evalue=6e-66,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 29343; Mature: 29343

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRNNRMMFMVLLALGIVFFYSMKAYAAPQNTMPIPKINISVDNANNPTEYVDNIKLLI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
MLTVLTLLPSFIVMMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EINTKAIQPYMKNKITQEQAVEIGAKPLRQFMLKQTRQKDLKLFVELAKPNFKVTKDNAP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
LYIVVPAFIISELKTAFQIGFLLFIPFLIIDLVVASVLMSMGMFMLPPVMISLPFKLLLF
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMVDGWYLLVKSLVMSFG
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKRNNRMMFMVLLALGIVFFYSMKAYAAPQNTMPIPKINISVDNANNPTEYVDNIKLLI
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
MLTVLTLLPSFIVMMTSFVRTIVVFGFLRNAMGTQQSPPNQVMIGLALFLTLFIMQPVYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EINTKAIQPYMKNKITQEQAVEIGAKPLRQFMLKQTRQKDLKLFVELAKPNFKVTKDNAP
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
LYIVVPAFIISELKTAFQIGFLLFIPFLIIDLVVASVLMSMGMFMLPPVMISLPFKLLLF
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMVDGWYLLVKSLVMSFG
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]