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The map label for this gene is 226950043

Identifier: 226950043

GI number: 226950043

Start: 2995558

End: 2997243

Strand: Reverse

Name: 226950043

Synonym: CLM_2996

Alternate gene names: NA

Gene position: 2997243-2995558 (Counterclockwise)

Preceding gene: 226950044

Following gene: 226950042

Centisome position: 72.13

GC content: 27.7

Gene sequence:

>1686_bases
ATGAAAGCACTATTAGTAGCCATTAACTCTAAATATATTCATAGCAATCTAGCTCTTAGATATTTAAGAGCTAATACAGA
GGATTTAAATTATGAGTGTGTGTTAAAAGAATTTACCATAAATGATAGAAAAGAAAATATATTAGAAAAAATAATTATGG
AAAAAGCTGATTTAGTAGCTTTTTCTTGCTATATATGGAATTTAGAATATGTAGAGGAACTAGCAAACTTAATTAAATTA
GTAAAACCTTCTACAGAAATAGTTTTTGGGGGACCAGAAGTTTCATATGATAGTGAAAGTTTTCTAAGGAAAGTCCCTGG
AGAATATGTTATAGAGGGAGAAGGAGAAGAAACCTTTAGAGAATTTATTAAATGCAAAATAGAAAATAAAAGCGTAGATA
GGGTAAAGGGGCTATATATTAAGACATTAAATAGTATAGAGTATACTGGGGAAAGACATAATATTTCTATGGATTCGGTA
GTATTTCCTTATAAAGAAGAGGAAGATTTAAAAAATAAAATAGTTTATTATGAGGCTTCAAGGGGGTGTCCTTTTAAGTG
TAAGTATTGTTTGTCTTCCACACTGCACGGGGTAAGATTTCATGACATAGAAAGAGTAAAGAAAGAAATTAAATTTTTAG
TAGATAAAAATGTTAAGCTTATTAAATTCGTAGATAGAACTTTTAATTGTAATCACAAATTTGCAATGGGAATATGGGAG
TATATTCTGAATCTGGATACGGATGCTACTTTTCATTTTGAAATATCCGCTGACTTGCTTACAAAGGAAGAACTGGAAAT
TTTAGCAAAAGGGAAAGAGGGCAGGATTCAATTTGAAGTGGGAGTTCAAACTACTAATAATGAAGTTCTAAAAAATATAA
ATAGACATGTAAATTTTGAAACTATTAAAGAAAAGGTAGAGGAGCTTAAAAATCTTAAGAATATAAAGCAACATTTAGAT
CTCATCGCAGGGCTGCCAGGAGAGGATTATAACTCTTTTAAAAATTCTTTCAATGATGTTTATAGTATAGAGCCTGAGGA
AATACAATTAGGATTTTTAAAACTTTTAAAGGGATCTTCTATGAGGCTAGAGGCAGAAAAGTGGGGTATGGTATATTCAC
CTTATCCTCCTTATGAAATATTAAGCACAAAGGACATAAGTTATGAGGAACTGCTTATACTAAAAAAGGTAGAAGCAGTA
GTAGATAAATATTATAATTCAGGGAAGTTTAGCAATATACTAAAATATTTTAGGTCAGAATTTAAAGAACCATTTGATTT
TTATTATAGTTTAGCCATGTTTTGTAATAACAAAGGATATTTTGATAGAAATATATCTGGGCCTCAATACTATAAGGTTT
TTATAGAATTTAACGAAGAAGTTCTAAAGAAAGATAGCTTATTTTTAAAAGAAATAATAAAATATGATTATTTAAAATTT
AATAAAAAGCAATGGTTACCAGAATTTTTAATTAGAGATATAAATAAGAAAATTAAAAAAATTTTTAAAGATAAGGTACT
ACAAAATGAAGGTCAAGTATCCGATAATATTCATGTGGAGAAATTTTTTATAGATGTAGAGAAATTTATAAAAGAAAATA
TAAAAGAAAAAAGAGAAATATATGTCATGTTTGACGAAAAAAATAGAGAGAATATAGCTTTTCTAACAAACTATAAGTAT
AGCTAA

Upstream 100 bases:

>100_bases
ATAAAAGATTTAAAATCTTCCGATGGAGTGTATTACATAAAAGGGAAGAAAAAAATAAATACTAATACCAAAGAGGACGA
AAAGAGGAAGGAAGAAATTA

Downstream 100 bases:

>100_bases
AAAATTTAAAGAAAATTTAAAAAATTTAAAAAAAGGGTACTATAAAGTTAAGTTCAATTATGCGATAATATTTATATAAA
GAAATTTTCATAGATGTAGA

Product: putative B12-binding Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVAFSCYIWNLEYVEELANLIKL
VKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFREFIKCKIENKSVDRVKGLYIKTLNSIEYTGERHNISMDSV
VFPYKEEEDLKNKIVYYEASRGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMGIWE
YILNLDTDATFHFEISADLLTKEELEILAKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIKEKVEELKNLKNIKQHLD
LIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSSMRLEAEKWGMVYSPYPPYEILSTKDISYEELLILKKVEAV
VDKYYNSGKFSNILKYFRSEFKEPFDFYYSLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEIIKYDYLKF
NKKQWLPEFLIRDINKKIKKIFKDKVLQNEGQVSDNIHVEKFFIDVEKFIKENIKEKREIYVMFDEKNRENIAFLTNYKY
S

Sequences:

>Translated_561_residues
MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVAFSCYIWNLEYVEELANLIKL
VKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFREFIKCKIENKSVDRVKGLYIKTLNSIEYTGERHNISMDSV
VFPYKEEEDLKNKIVYYEASRGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMGIWE
YILNLDTDATFHFEISADLLTKEELEILAKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIKEKVEELKNLKNIKQHLD
LIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSSMRLEAEKWGMVYSPYPPYEILSTKDISYEELLILKKVEAV
VDKYYNSGKFSNILKYFRSEFKEPFDFYYSLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEIIKYDYLKF
NKKQWLPEFLIRDINKKIKKIFKDKVLQNEGQVSDNIHVEKFFIDVEKFIKENIKEKREIYVMFDEKNRENIAFLTNYKY
S
>Mature_561_residues
MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVAFSCYIWNLEYVEELANLIKL
VKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFREFIKCKIENKSVDRVKGLYIKTLNSIEYTGERHNISMDSV
VFPYKEEEDLKNKIVYYEASRGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMGIWE
YILNLDTDATFHFEISADLLTKEELEILAKGKEGRIQFEVGVQTTNNEVLKNINRHVNFETIKEKVEELKNLKNIKQHLD
LIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSSMRLEAEKWGMVYSPYPPYEILSTKDISYEELLILKKVEAV
VDKYYNSGKFSNILKYFRSEFKEPFDFYYSLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEIIKYDYLKF
NKKQWLPEFLIRDINKKIKKIFKDKVLQNEGQVSDNIHVEKFFIDVEKFIKENIKEKREIYVMFDEKNRENIAFLTNYKY
S

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 66421; Mature: 66421

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVA
CCEEEEEECCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEE
FSCYIWNLEYVEELANLIKLVKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFR
EEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEEECCCHHHHH
EFIKCKIENKSVDRVKGLYIKTLNSIEYTGERHNISMDSVVFPYKEEEDLKNKIVYYEAS
HHHEEEECCCCHHHHHHHHEEEECCCEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECC
RGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMGIWE
CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHH
YILNLDTDATFHFEISADLLTKEELEILAKGKEGRIQFEVGVQTTNNEVLKNINRHVNFE
HHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECEECCHHHHHHHHHCCCHH
TIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
MRLEAEKWGMVYSPYPPYEILSTKDISYEELLILKKVEAVVDKYYNSGKFSNILKYFRSE
CEEEHHHCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FKEPFDFYYSLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEIIKYDYLKF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHC
NKKQWLPEFLIRDINKKIKKIFKDKVLQNEGQVSDNIHVEKFFIDVEKFIKENIKEKREI
CHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCEEE
YVMFDEKNRENIAFLTNYKYS
EEEEECCCCCCEEEEECCCCC
>Mature Secondary Structure
MKALLVAINSKYIHSNLALRYLRANTEDLNYECVLKEFTINDRKENILEKIIMEKADLVA
CCEEEEEECCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEE
FSCYIWNLEYVEELANLIKLVKPSTEIVFGGPEVSYDSESFLRKVPGEYVIEGEGEETFR
EEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEEECCCHHHHH
EFIKCKIENKSVDRVKGLYIKTLNSIEYTGERHNISMDSVVFPYKEEEDLKNKIVYYEAS
HHHEEEECCCCHHHHHHHHEEEECCCEECCCCCCCCCCCEECCCCCCCCCCCEEEEEECC
RGCPFKCKYCLSSTLHGVRFHDIERVKKEIKFLVDKNVKLIKFVDRTFNCNHKFAMGIWE
CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHHHH
YILNLDTDATFHFEISADLLTKEELEILAKGKEGRIQFEVGVQTTNNEVLKNINRHVNFE
HHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECEECCHHHHHHHHHCCCHH
TIKEKVEELKNLKNIKQHLDLIAGLPGEDYNSFKNSFNDVYSIEPEEIQLGFLKLLKGSS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
MRLEAEKWGMVYSPYPPYEILSTKDISYEELLILKKVEAVVDKYYNSGKFSNILKYFRSE
CEEEHHHCCEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FKEPFDFYYSLAMFCNNKGYFDRNISGPQYYKVFIEFNEEVLKKDSLFLKEIIKYDYLKF
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHC
NKKQWLPEFLIRDINKKIKKIFKDKVLQNEGQVSDNIHVEKFFIDVEKFIKENIKEKREI
CHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCEEE
YVMFDEKNRENIAFLTNYKYS
EEEEECCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]