Click here to switch to the map view.

The map label for this gene is 226949968

Identifier: 226949968

GI number: 226949968

Start: 2932346

End: 2933503

Strand: Reverse

Name: 226949968

Synonym: CLM_2921

Alternate gene names: NA

Gene position: 2933503-2932346 (Counterclockwise)

Preceding gene: 226949969

Following gene: 226949967

Centisome position: 70.6

GC content: 28.84

Gene sequence:

>1158_bases
ATGGAGTTATATATATTTGACAGGAATTTAGAATTAATAGGTATATTAGATACTTTTATCTCTTTAAGGTGGATTAGAAG
GTATAGTAAAACAGGAGAATTTGAATTACATTGTGCTTTAGATTCTAATATCTTAGAATTGTTAAAAAAAGGTAATGTGG
TTTATAAAAAGAATGATGTTGAAGCTGGTTATATAGAAACAAGGCAACTAAAAATAGGAGAAGATGGACAAGAATATTTA
GAAGTTAAAGGTAAGTTTTTAACTAATTATTTAGATAGGCGCATTAGTTGGGATAGAGTTAGTTTTGATGGGAAAACAGA
GGATTTAATGAGAAAGCTAGTATTAGAAAATGCTATAACTCCAATTAATCTAGATAGAAAAATACCCAATGTAATTCTAG
GAGATTTAAAAGGATTTAACGAAGATATTAAATATACTAACAGCTTTGGAAATATAATAGAGCAGTTAGAAAATATAAGT
AATACAAATAATCTAGGATATAGAAATATATTAAATATTAAAAATAGAAAAATACTGTTTGATGTATACAAAGGTGTTGA
TAGAACCATAAACAATGGGACTATAGCACCTTGTATTTTTTCTAGAAGCTTTGAGAATATCTTAGAACAAGAATACATGG
ATAGCTTAAACAATTATAAAAACACAACTTTAATTGCTGGTGCTGGAGAAGGTAAAGATAGAAAATTAACTAGTATTGGA
AATACCAAAGGGTTAGATAGATTTGAGCTATATGTAGATGCTAGAGATATAACTGATAAAGAAGAAAAGAAAAAAATGGT
AGCAGATAGAGACGAGGAAGGTAATGTTATTGGAGAACATGAGGAAACTTATGAAGTTGAAATCCCTTGGGAGAGGTATA
AACCATTATTGATACAAAGAGGAAAAGAAAAGCTAGAAGAATGTAAGGAAATCCAAACTTTTGATAGCAAAATAAACACA
CAGGGAAATAACAAATATAAAGTTGATTTCAACTTAGGTGACATTGTAACTGTAGTGGATAAGAAGTGGGGAATAAGAAT
AGATACCCCAATTACAGAAATAGAAGAGGTATATGAGGAAAAAGGTTTAGAGGTTAATGTAGTGTTTGGAAATAATATCC
CTACTATAATAGATAAAATAAAACAGGTGGTGAGGTAA

Upstream 100 bases:

>100_bases
AGATGTTGGAGATAATTTATTCCGTTACAATGCGGATAGTAATTTGGATAATTTAGAAGTTAATATATATTTTAGTCCAC
AATATTTGGGGGTGTAGTTT

Downstream 100 bases:

>100_bases
TGGAAAGAAGTAGTTTTTTCAATGCGGTATTAGACCAGCAAGGTAATCCAGATAGGTCTTATTTAGCTGAAGATTTTGCT
AGATACTTTAGTACATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Minor Protein N- Region

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MELYIFDRNLELIGILDTFISLRWIRRYSKTGEFELHCALDSNILELLKKGNVVYKKNDVEAGYIETRQLKIGEDGQEYL
EVKGKFLTNYLDRRISWDRVSFDGKTEDLMRKLVLENAITPINLDRKIPNVILGDLKGFNEDIKYTNSFGNIIEQLENIS
NTNNLGYRNILNIKNRKILFDVYKGVDRTINNGTIAPCIFSRSFENILEQEYMDSLNNYKNTTLIAGAGEGKDRKLTSIG
NTKGLDRFELYVDARDITDKEEKKKMVADRDEEGNVIGEHEETYEVEIPWERYKPLLIQRGKEKLEECKEIQTFDSKINT
QGNNKYKVDFNLGDIVTVVDKKWGIRIDTPITEIEEVYEEKGLEVNVVFGNNIPTIIDKIKQVVR

Sequences:

>Translated_385_residues
MELYIFDRNLELIGILDTFISLRWIRRYSKTGEFELHCALDSNILELLKKGNVVYKKNDVEAGYIETRQLKIGEDGQEYL
EVKGKFLTNYLDRRISWDRVSFDGKTEDLMRKLVLENAITPINLDRKIPNVILGDLKGFNEDIKYTNSFGNIIEQLENIS
NTNNLGYRNILNIKNRKILFDVYKGVDRTINNGTIAPCIFSRSFENILEQEYMDSLNNYKNTTLIAGAGEGKDRKLTSIG
NTKGLDRFELYVDARDITDKEEKKKMVADRDEEGNVIGEHEETYEVEIPWERYKPLLIQRGKEKLEECKEIQTFDSKINT
QGNNKYKVDFNLGDIVTVVDKKWGIRIDTPITEIEEVYEEKGLEVNVVFGNNIPTIIDKIKQVVR
>Mature_385_residues
MELYIFDRNLELIGILDTFISLRWIRRYSKTGEFELHCALDSNILELLKKGNVVYKKNDVEAGYIETRQLKIGEDGQEYL
EVKGKFLTNYLDRRISWDRVSFDGKTEDLMRKLVLENAITPINLDRKIPNVILGDLKGFNEDIKYTNSFGNIIEQLENIS
NTNNLGYRNILNIKNRKILFDVYKGVDRTINNGTIAPCIFSRSFENILEQEYMDSLNNYKNTTLIAGAGEGKDRKLTSIG
NTKGLDRFELYVDARDITDKEEKKKMVADRDEEGNVIGEHEETYEVEIPWERYKPLLIQRGKEKLEECKEIQTFDSKINT
QGNNKYKVDFNLGDIVTVVDKKWGIRIDTPITEIEEVYEEKGLEVNVVFGNNIPTIIDKIKQVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44709; Mature: 44709

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYIFDRNLELIGILDTFISLRWIRRYSKTGEFELHCALDSNILELLKKGNVVYKKNDV
CEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCEEEEECCC
EAGYIETRQLKIGEDGQEYLEVKGKFLTNYLDRRISWDRVSFDGKTEDLMRKLVLENAIT
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCC
PINLDRKIPNVILGDLKGFNEDIKYTNSFGNIIEQLENISNTNNLGYRNILNIKNRKILF
CCCCCCCCCHHHHHHHCCCCCHHCEECHHHHHHHHHHHCCCCCCCCCHHEECCCCCEEEH
DVYKGVDRTINNGTIAPCIFSRSFENILEQEYMDSLNNYKNTTLIAGAGEGKDRKLTSIG
HHHHCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECC
NTKGLDRFELYVDARDITDKEEKKKMVADRDEEGNVIGEHEETYEVEIPWERYKPLLIQR
CCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCEECCCCCEEEEECCHHHCCHHHHHC
GKEKLEECKEIQTFDSKINTQGNNKYKVDFNLGDIVTVVDKKWGIRIDTPITEIEEVYEE
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEECCCHHHHHHHHHH
KGLEVNVVFGNNIPTIIDKIKQVVR
CCCEEEEEECCCCCHHHHHHHHHHC
>Mature Secondary Structure
MELYIFDRNLELIGILDTFISLRWIRRYSKTGEFELHCALDSNILELLKKGNVVYKKNDV
CEEEEEECCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCEEEEECCC
EAGYIETRQLKIGEDGQEYLEVKGKFLTNYLDRRISWDRVSFDGKTEDLMRKLVLENAIT
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCC
PINLDRKIPNVILGDLKGFNEDIKYTNSFGNIIEQLENISNTNNLGYRNILNIKNRKILF
CCCCCCCCCHHHHHHHCCCCCHHCEECHHHHHHHHHHHCCCCCCCCCHHEECCCCCEEEH
DVYKGVDRTINNGTIAPCIFSRSFENILEQEYMDSLNNYKNTTLIAGAGEGKDRKLTSIG
HHHHCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECC
NTKGLDRFELYVDARDITDKEEKKKMVADRDEEGNVIGEHEETYEVEIPWERYKPLLIQR
CCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCEECCCCCEEEEECCHHHCCHHHHHC
GKEKLEECKEIQTFDSKINTQGNNKYKVDFNLGDIVTVVDKKWGIRIDTPITEIEEVYEE
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEECCCHHHHHHHHHH
KGLEVNVVFGNNIPTIIDKIKQVVR
CCCEEEEEECCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA