| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is yloV [H]
Identifier: 226949849
GI number: 226949849
Start: 2807770
End: 2809395
Strand: Reverse
Name: yloV [H]
Synonym: CLM_2796
Alternate gene names: 226949849
Gene position: 2809395-2807770 (Counterclockwise)
Preceding gene: 226949850
Following gene: 226949848
Centisome position: 67.61
GC content: 30.87
Gene sequence:
>1626_bases ATGGAACATATGAAAATAAAAGGTGCAGATTTTTATAACATGGTAATAAATGGGAGTAATAAATTAGAAGAAAAAAAAGA ATTTGTAAATTCTCTAAATGTTTTCCCAGTACCAGATGGTGATACAGGAACAAATATGTCTATGACCTTTAGATCTGCGG TAAAAGAAATAGAAGGATTAAAAGAGGAATCCATAGGAGGAATAGCTAAAAAAGTAGCTAAAGGAGCTCTTATGGGTGCT AGAGGTAACTCAGGAGTTATACTATCCCAAATATTTAGAGGAATATCTAAAGGATTAGAAGATAAGGATGAGGTGGATGC AAGAGAATTTGCAAATGCACTATTAGAGGGATCAAAGTCTGCCTATAAAGCTGTAATGAGGCCTACAGAGGGAACTATAT TAACAATTATAAGAGCTGCAGGAGAGAGTGCGGTAAAAAGTGAAGCAGAAGATGTAACTTCTTTACTTGAGGAAGTTTGT GAACATAGTGAAGTAGTTTTAAATAAAACACCAGATATGCTTCCTGTACTGAAAAAAGCAAAAGTAGTAGATGCAGGAGG GCAAGGCTTATTAATAATATTACAGGGAATGTTAGAGGTATTAGATAAGGACCTAGAAGTAGAAATAGGTGGAGAAAATA AGGTTTCTGATCCTAATACTAAAATTGAACAATATGAACAAGACATAGAATTTGGATATTGCACAGAATTTTTTGTTATG GCAGAAAATGTAGATGTGGATAAATTCAAAGGTCAATTAGAATCTTTAGGAGATTCTATGATAGTAGTGGCTGCGGATGG TTTGGTAAAAGTTCACATTCATACAAATGATCCTGGAGACATCTTATCTAAAGCTATAAAGCTTGGACCACTTTCTAAAA TAAAAATAGATAATATGAGAGAACAACATAAACATATAATAGATATGAATAGTGAAGAAAATAAAGTGGAAAAAGAAGAA AGTGAATTAAAAAAATATGGATTTATATCTGTAGCATTAGGAGAAGGCATAACAGAAATATTTAAAGATTTAGGTGTAGA TGAAGTTATAGAAGGCGGTCAAACTATGAATCCAAGTACAGAGGACATAGTTAAGGCTATAAATAAAATAAATGCGGAAA ATATATTTATATTACCAAATAATAAAAATATAATTATGGCAGCTACACAAGCGGCGGAGCTATCCGAAAAAAATATAATA GTTATACCTACTAAAACTATACCACAAGGCATAACAAGTATAACAATGTTTAATCCAGAAGCAGAATCTAAAGAAAATGA GAATAACATGAAGGAAGCTATAAAGGCAGTAGCTACAGGCTCTATAACCTATGCAGTTAGAGATACAGAAATGGACGGAA AAATAATTAAAGAAAATGATATACTAGGCTTAATAGAAGGTAAAATATCTGAAGTAGGAAAGGATATTTTTGAAGTTTCA AAAGCTGTTCTAGAAGAAATGATAGATGAAGACAGTGAACTTATAAGCATATTCTATGGAAAAGATTGTGATGAAGAAAA AATAGAAAAATTTATAGAAGAATTAGAAGAAAAATATGAAGATTTAGATATTCAATGTTATAATGGAAAACAACCATTAT ATTATTTTATAATGTCTGTAGAATAA
Upstream 100 bases:
>100_bases TACAAAAGATAAGATATAACATAGAAAACTATACAGGACTTAAGGTTTCCAGTATTACTGTAAATGTTCAGGGTGTTAGA GTTTAGGAGGTAAGTCATAA
Downstream 100 bases:
>100_bases AAAAAGCCTAAGGGCTTTTTTTATTATATTTAAACTTTATTTAAACAATTTAAATTTTTATTACTTCTTTATCCGATGAC TACACGCTCTAATATTCCCA
Product: DAK2 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MEHMKIKGADFYNMVINGSNKLEEKKEFVNSLNVFPVPDGDTGTNMSMTFRSAVKEIEGLKEESIGGIAKKVAKGALMGA RGNSGVILSQIFRGISKGLEDKDEVDAREFANALLEGSKSAYKAVMRPTEGTILTIIRAAGESAVKSEAEDVTSLLEEVC EHSEVVLNKTPDMLPVLKKAKVVDAGGQGLLIILQGMLEVLDKDLEVEIGGENKVSDPNTKIEQYEQDIEFGYCTEFFVM AENVDVDKFKGQLESLGDSMIVVAADGLVKVHIHTNDPGDILSKAIKLGPLSKIKIDNMREQHKHIIDMNSEENKVEKEE SELKKYGFISVALGEGITEIFKDLGVDEVIEGGQTMNPSTEDIVKAINKINAENIFILPNNKNIIMAATQAAELSEKNII VIPTKTIPQGITSITMFNPEAESKENENNMKEAIKAVATGSITYAVRDTEMDGKIIKENDILGLIEGKISEVGKDIFEVS KAVLEEMIDEDSELISIFYGKDCDEEKIEKFIEELEEKYEDLDIQCYNGKQPLYYFIMSVE
Sequences:
>Translated_541_residues MEHMKIKGADFYNMVINGSNKLEEKKEFVNSLNVFPVPDGDTGTNMSMTFRSAVKEIEGLKEESIGGIAKKVAKGALMGA RGNSGVILSQIFRGISKGLEDKDEVDAREFANALLEGSKSAYKAVMRPTEGTILTIIRAAGESAVKSEAEDVTSLLEEVC EHSEVVLNKTPDMLPVLKKAKVVDAGGQGLLIILQGMLEVLDKDLEVEIGGENKVSDPNTKIEQYEQDIEFGYCTEFFVM AENVDVDKFKGQLESLGDSMIVVAADGLVKVHIHTNDPGDILSKAIKLGPLSKIKIDNMREQHKHIIDMNSEENKVEKEE SELKKYGFISVALGEGITEIFKDLGVDEVIEGGQTMNPSTEDIVKAINKINAENIFILPNNKNIIMAATQAAELSEKNII VIPTKTIPQGITSITMFNPEAESKENENNMKEAIKAVATGSITYAVRDTEMDGKIIKENDILGLIEGKISEVGKDIFEVS KAVLEEMIDEDSELISIFYGKDCDEEKIEKFIEELEEKYEDLDIQCYNGKQPLYYFIMSVE >Mature_541_residues MEHMKIKGADFYNMVINGSNKLEEKKEFVNSLNVFPVPDGDTGTNMSMTFRSAVKEIEGLKEESIGGIAKKVAKGALMGA RGNSGVILSQIFRGISKGLEDKDEVDAREFANALLEGSKSAYKAVMRPTEGTILTIIRAAGESAVKSEAEDVTSLLEEVC EHSEVVLNKTPDMLPVLKKAKVVDAGGQGLLIILQGMLEVLDKDLEVEIGGENKVSDPNTKIEQYEQDIEFGYCTEFFVM AENVDVDKFKGQLESLGDSMIVVAADGLVKVHIHTNDPGDILSKAIKLGPLSKIKIDNMREQHKHIIDMNSEENKVEKEE SELKKYGFISVALGEGITEIFKDLGVDEVIEGGQTMNPSTEDIVKAINKINAENIFILPNNKNIIMAATQAAELSEKNII VIPTKTIPQGITSITMFNPEAESKENENNMKEAIKAVATGSITYAVRDTEMDGKIIKENDILGLIEGKISEVGKDIFEVS KAVLEEMIDEDSELISIFYGKDCDEEKIEKFIEELEEKYEDLDIQCYNGKQPLYYFIMSVE
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 59705; Mature: 59705
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHMKIKGADFYNMVINGSNKLEEKKEFVNSLNVFPVPDGDTGTNMSMTFRSAVKEIEGL CCCCEECCCCEEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCC KEESIGGIAKKVAKGALMGARGNSGVILSQIFRGISKGLEDKDEVDAREFANALLEGSKS HHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCHH AYKAVMRPTEGTILTIIRAAGESAVKSEAEDVTSLLEEVCEHSEVVLNKTPDMLPVLKKA HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHH KVVDAGGQGLLIILQGMLEVLDKDLEVEIGGENKVSDPNTKIEQYEQDIEFGYCTEFFVM HEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE AENVDVDKFKGQLESLGDSMIVVAADGLVKVHIHTNDPGDILSKAIKLGPLSKIKIDNMR ECCCCHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHCCCCCCEEEHHHH EQHKHIIDMNSEENKVEKEESELKKYGFISVALGEGITEIFKDLGVDEVIEGGQTMNPST HHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEHHCCHHHHHHHCCHHHHHCCCCCCCCCH EDIVKAINKINAENIFILPNNKNIIMAATQAAELSEKNIIVIPTKTIPQGITSITMFNPE HHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHCCCCCEEEEECCCCCCCCCEEEEECCC AESKENENNMKEAIKAVATGSITYAVRDTEMDGKIIKENDILGLIEGKISEVGKDIFEVS CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHH KAVLEEMIDEDSELISIFYGKDCDEEKIEKFIEELEEKYEDLDIQCYNGKQPLYYFIMSV HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEE E C >Mature Secondary Structure MEHMKIKGADFYNMVINGSNKLEEKKEFVNSLNVFPVPDGDTGTNMSMTFRSAVKEIEGL CCCCEECCCCEEEEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCC KEESIGGIAKKVAKGALMGARGNSGVILSQIFRGISKGLEDKDEVDAREFANALLEGSKS HHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCHH AYKAVMRPTEGTILTIIRAAGESAVKSEAEDVTSLLEEVCEHSEVVLNKTPDMLPVLKKA HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHH KVVDAGGQGLLIILQGMLEVLDKDLEVEIGGENKVSDPNTKIEQYEQDIEFGYCTEFFVM HEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE AENVDVDKFKGQLESLGDSMIVVAADGLVKVHIHTNDPGDILSKAIKLGPLSKIKIDNMR ECCCCHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHCCCCCCEEEHHHH EQHKHIIDMNSEENKVEKEESELKKYGFISVALGEGITEIFKDLGVDEVIEGGQTMNPST HHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEHHCCHHHHHHHCCHHHHHCCCCCCCCCH EDIVKAINKINAENIFILPNNKNIIMAATQAAELSEKNIIVIPTKTIPQGITSITMFNPE HHHHHHHHHCCCCEEEEEECCCCEEEEECCHHHCCCCCEEEEECCCCCCCCCEEEEECCC AESKENENNMKEAIKAVATGSITYAVRDTEMDGKIIKENDILGLIEGKISEVGKDIFEVS CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHH KAVLEEMIDEDSELISIFYGKDCDEEKIEKFIEELEEKYEDLDIQCYNGKQPLYYFIMSV HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEE E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]