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The map label for this gene is ribF [H]

Identifier: 226949767

GI number: 226949767

Start: 2719855

End: 2720775

Strand: Reverse

Name: ribF [H]

Synonym: CLM_2707

Alternate gene names: 226949767

Gene position: 2720775-2719855 (Counterclockwise)

Preceding gene: 226949768

Following gene: 226949766

Centisome position: 65.48

GC content: 25.3

Gene sequence:

>921_bases
ATGATAGTTATGGAGGATAACTTTTCTACTAAATTAGAAGATAAAACTTATATAGCTTTAGGAAGTTTTGATGGACTTCA
TAAAGGTCATATGAAATTAATAAAAGAAATAAAAAAAATGGCTAAGGATAATGGCGGTAAAAGTATGGTTTTAACTTTTA
AAGAACATCCTTTAAATACTATAAATAAAGATTTAGCTCCCAAAATTCTATTAGATAATCCTAGTAAGGTGAAAATATTG
AAAGAAAATGGAGTAGATCTAGTTAATTTTATTAATTTTGATAAAGAATATATGAAGTTATGTCCAGAGGATTTTATAAA
AAAAATGATATATTATTATAATGCAGGTGGATTTGTAGTAGGATTTAATTATAGATTTGGATATAAAAATTTAGGAGATA
TAGAACTTCTAGATAAAATGAGTAAAAAATTTAATTTTAATCTTAAAGTAGTTTCCCCAGTTAAATATTTAAATGAAATC
ATAAGCAGTTCTAAAATAAGACATATATTAATAGAGGATGGCAATGTAGATAAGTCAAAAAAAATGCTAGGTAGGAACTA
TTTTTTAAAGGGCAACATAGTAAAAGGGAAACAGTTAGGGAGAAAGCTTGGGTACCCTACAGTGAACCTAAATTATAATA
CAAAATATGTTCTTCCAAGAGGGGGAGTGTACTATACCCTAATAGAATATGAAAATAAACTTTATAAGGGTATTACTAAT
GTAGGTTATAATCCTACAGTAGAAGATAAAAAGTTAAATATAGAAACTCATATATTAGATTTCCATAAGGATATATATGG
AGAAAATATAGTTATATATTTTTCAAAGAGAATTAGAGATGAGAAAAAATTCTCTTCTTTAGAAGAGTTAAAGAAGCAAT
TAAAAAAGGATAAAAGTTTTGCTAAAAGACAAAGTATGTAA

Upstream 100 bases:

>100_bases
ATATAGAACTTATATAGAAGATGATAATTTTATAGGATTAGGAATGAAAAATGCATATGGATTTAAAATTCATAAATTAT
TAACTTAGGAGTAATAGCTT

Downstream 100 bases:

>100_bases
ATTAATTTATAAAAATTAATTTACAATTATATATTTATTTGTTATAATACATTTCGTGAACCTTATACTAGGAATACTGA
ATTGCCAACGGTATCCTTGG

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MIVMEDNFSTKLEDKTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKEHPLNTINKDLAPKILLDNPSKVKIL
KENGVDLVNFINFDKEYMKLCPEDFIKKMIYYYNAGGFVVGFNYRFGYKNLGDIELLDKMSKKFNFNLKVVSPVKYLNEI
ISSSKIRHILIEDGNVDKSKKMLGRNYFLKGNIVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKLYKGITN
VGYNPTVEDKKLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKSFAKRQSM

Sequences:

>Translated_306_residues
MIVMEDNFSTKLEDKTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKEHPLNTINKDLAPKILLDNPSKVKIL
KENGVDLVNFINFDKEYMKLCPEDFIKKMIYYYNAGGFVVGFNYRFGYKNLGDIELLDKMSKKFNFNLKVVSPVKYLNEI
ISSSKIRHILIEDGNVDKSKKMLGRNYFLKGNIVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKLYKGITN
VGYNPTVEDKKLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKSFAKRQSM
>Mature_306_residues
MIVMEDNFSTKLEDKTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKEHPLNTINKDLAPKILLDNPSKVKIL
KENGVDLVNFINFDKEYMKLCPEDFIKKMIYYYNAGGFVVGFNYRFGYKNLGDIELLDKMSKKFNFNLKVVSPVKYLNEI
ISSSKIRHILIEDGNVDKSKKMLGRNYFLKGNIVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKLYKGITN
VGYNPTVEDKKLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKSFAKRQSM

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=298, Percent_Identity=31.8791946308725, Blast_Score=177, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17541882, Length=125, Percent_Identity=33.6, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24644927, Length=121, Percent_Identity=35.5371900826446, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 35572; Mature: 35572

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVMEDNFSTKLEDKTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKEHPLNT
CEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
INKDLAPKILLDNPSKVKILKENGVDLVNFINFDKEYMKLCPEDFIKKMIYYYNAGGFVV
HHHCCCCEEEECCCCEEEEEECCCCCEEEHHCCCHHHHHCCHHHHHHHHHHEECCCCEEE
GFNYRFGYKNLGDIELLDKMSKKFNFNLKVVSPVKYLNEIISSSKIRHILIEDGNVDKSK
EEEEEECCCCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCEEEEEEECCCCCHHH
KMLGRNYFLKGNIVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKLYKGITN
HHHCCCEEEECCEECHHHHHHHHCCCEEEECCCEEEEEECCCEEEEEEEHHHHHHHHHHC
VGYNPTVEDKKLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKSF
CCCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHH
AKRQSM
HHHCCC
>Mature Secondary Structure
MIVMEDNFSTKLEDKTYIALGSFDGLHKGHMKLIKEIKKMAKDNGGKSMVLTFKEHPLNT
CEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCH
INKDLAPKILLDNPSKVKILKENGVDLVNFINFDKEYMKLCPEDFIKKMIYYYNAGGFVV
HHHCCCCEEEECCCCEEEEEECCCCCEEEHHCCCHHHHHCCHHHHHHHHHHEECCCCEEE
GFNYRFGYKNLGDIELLDKMSKKFNFNLKVVSPVKYLNEIISSSKIRHILIEDGNVDKSK
EEEEEECCCCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCEEEEEEECCCCCHHH
KMLGRNYFLKGNIVKGKQLGRKLGYPTVNLNYNTKYVLPRGGVYYTLIEYENKLYKGITN
HHHCCCEEEECCEECHHHHHHHHCCCEEEECCCEEEEEECCCEEEEEEEHHHHHHHHHHC
VGYNPTVEDKKLNIETHILDFHKDIYGENIVIYFSKRIRDEKKFSSLEELKKQLKKDKSF
CCCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHH
AKRQSM
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9454067; 9108293; 9384377 [H]