| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is dapG [H]
Identifier: 226949762
GI number: 226949762
Start: 2714042
End: 2715247
Strand: Reverse
Name: dapG [H]
Synonym: CLM_2702
Alternate gene names: 226949762
Gene position: 2715247-2714042 (Counterclockwise)
Preceding gene: 226949763
Following gene: 226949761
Centisome position: 65.34
GC content: 31.59
Gene sequence:
>1206_bases ATGAAAATCTTAATTCAAAAGTTTGGAGGAACATCTGTATCTACAGCTGAAAGAAGATCTTTAGTAGTAGATAAAATAGT TAAGGCGAAAAAAGCAGGTTATTATCCAGTGGTGGTAGTATCTGCTATGGGTAGAAAAGGACAGCCTTATGCTACAGACA CATTGAGATCTTTAGTTGGAGAAGACTTTTTAGATAAAAATACCTTAGCTGCTGATCTTTTAATGGGTTGCGGTGAATTA ATAAGCACAGTAGTTATGAGTTCAGAACTTTTTAATAAGGGAATAGATGCAGTACCTTTAATGGGAGGACAGGCAGGTAT TATAACAGATAATAATTTTAACAATGCTTCTGTACTTAGAGTAGAAAAGGATAGAATAGTAGATTTACTGAAAAAAGATA AAATTCCTGTAGTGGCAGGTTTTCAAGGGAAAAGTGAAGATGGTTATATAACTACCCTAGGAAGAGGTGGCAGTGATGTT ACTGCCGCACTTTTAGGAGCTGCATTAGAGGCTGAAAGTGTAGAAATATATACGGATGTAGATGGTATAATGACTGCAGA TCCTAGAATAGTAGAGAATGCCTCCTTAATAAAAGAAATAAGTTATAATGAGGTGTTTCAATTTGCAGATCAAGGGGCTA AGGTAATACATCCAAGGGCAGTAGAAATTGCTATGACGTCAAATACAAAACTTGTAATAAAAAACACTATGACAGATTGC AAAGGTACTACTATAAATAATATAGGAATTAAAAATTCAAATAATGTTATAACAGGTATTACCCATATGAGTAATAGAAC GCAAATTATAGTAGATGCAGAAGAAAATAAAGGAAATAAAAACTATACTAACCTATTAAATTCATTGGCAGAAAATTCTA TTAGTATTGACCTTATAAATGTTTTTCCTAAAGAAAAAATATTCACTATAGATGAAAAAGATTTTAATGAGTTTAGTTCT ATAATGGAAGGTTTAAAAATAAAATTTTCCTACTTAAAAGATTGTAGTAAAATAGCTATAATAGGTAGTAGAATGAGAGG GATACCTGGGGTTATGGCTAAAATATTAAAGGCACTTGTAGAAAGAAATATAGAAGTGCTTCAAACAGCAGACTCACATA CAACTATATGGTGTCTTGTTTCTAAGGAAGATACAGAAAAAGCTATAAAATCATTGCACTGTGAATTTAAGTTAGATTGT ATATAA
Upstream 100 bases:
>100_bases AGTGTCTTGGGACTCTGTAAAAAAAATAGGATCAAGAACTATAATAATTGATGCTGAAAAGAGAGAATTAAAAAAAATCC GCTAGGGAGATGGTAGACAA
Downstream 100 bases:
>100_bases ACAAAATTCTTAGCTTCAGGTGGAGTTTTAACTCAAATTTGAGTTAAGAAGTGCTTAGGTAGGTAATATCAGACATTATC TCTAACTTTATAAGTGGGAG
Product: aspartate kinase I
Products: NA
Alternate protein names: Aspartate kinase 1; Aspartokinase I [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVGEDFLDKNTLAADLLMGCGEL ISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLRVEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDV TAALLGAALEAESVEIYTDVDGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTSNTKLVIKNTMTDC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLINVFPKEKIFTIDEKDFNEFSS IMEGLKIKFSYLKDCSKIAIIGSRMRGIPGVMAKILKALVERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDC I
Sequences:
>Translated_401_residues MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVGEDFLDKNTLAADLLMGCGEL ISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLRVEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDV TAALLGAALEAESVEIYTDVDGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTSNTKLVIKNTMTDC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLINVFPKEKIFTIDEKDFNEFSS IMEGLKIKFSYLKDCSKIAIIGSRMRGIPGVMAKILKALVERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDC I >Mature_401_residues MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVGEDFLDKNTLAADLLMGCGEL ISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLRVEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDV TAALLGAALEAESVEIYTDVDGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTSNTKLVIKNTMTDC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLINVFPKEKIFTIDEKDFNEFSS IMEGLKIKFSYLKDCSKIAIIGSRMRGIPGVMAKILKALVERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDC I
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartokinase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=462, Percent_Identity=27.0562770562771, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1790455, Length=266, Percent_Identity=30.0751879699248, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1790376, Length=177, Percent_Identity=29.3785310734463, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320893, Length=364, Percent_Identity=24.4505494505494, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 43758; Mature: 43758
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVG CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHC EDFLDKNTLAADLLMGCGELISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLR CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEEEE VEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDVTAALLGAALEAESVEIYTDV ECHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECC DGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTSNTKLVIKNTMTDC CCEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLIN CCCEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE VFPKEKIFTIDEKDFNEFSSIMEGLKIKFSYLKDCSKIAIIGSRMRGIPGVMAKILKALV ECCCCEEEEECCCCHHHHHHHHHHHEEHHHHHHCCHHEEEEHHHHCCCHHHHHHHHHHHH ERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDCI HCCCEEEEECCCCEEEEEEEECCHHHHHHHHHCCCEEEECC >Mature Secondary Structure MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVG CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHC EDFLDKNTLAADLLMGCGELISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLR CHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEEEE VEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDVTAALLGAALEAESVEIYTDV ECHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECC DGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTSNTKLVIKNTMTDC CCEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLIN CCCEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE VFPKEKIFTIDEKDFNEFSSIMEGLKIKFSYLKDCSKIAIIGSRMRGIPGVMAKILKALV ECCCCEEEEECCCCHHHHHHHHHHHEEHHHHHHCCHHEEEEHHHHCCCHHHHHHHHHHHH ERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDCI HCCCEEEEECCCCEEEEEEEECCHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8098035; 9384377 [H]