| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949734
Identifier: 226949734
GI number: 226949734
Start: 2689722
End: 2690342
Strand: Reverse
Name: 226949734
Synonym: CLM_2674
Alternate gene names: NA
Gene position: 2690342-2689722 (Counterclockwise)
Preceding gene: 226949735
Following gene: 226949733
Centisome position: 64.75
GC content: 34.46
Gene sequence:
>621_bases ATGTATATGGATTATGTAGAAGAAGAGATACAAAAAGAAAATCATTATAAAGAGGAGAGATTAATTATGATAAAAGCAAA AAGAACAGGAACAAAGGTAACTACAGGAAAGGTTAGATTAAGCTATGCACATTTATTTGAGCCTCATGCAATAGAGGGAA ATGAGCCTAAATACAGTGTGAGTGTAATAATACCTAAGACAGATACAGAAACATTAAAAGCTATTAAAGAAGCTACTAAT GAGGCTAAGGAACTAGGAAAATCTAAATGGAATGGTAAAGTACCTGCAACTCTTAAGACACCTTTAAGAGACGGAGATAC AGAAAGACCAGACGACGAAGCTTATGCTAATTGTTATTTTCTAAATGCTAATAGTAAAAATAAGCCTGGTGTTGTTGATA AAAATGTACAACCTGTATTAGATGCTACAGAAGTATATAGCGGTTGCTATGCAAGACTTACTCTTAATTTTTATGCATAT AGTGCAAGTGGTAATAAAGGTATCGCTTGTGGATTAGGTAATGTCCAAAAGTTAGAAGATGGTGAACCTCTTGGAGGATT CACAAGAGCAGAGGACGACTTTGATTCTGTAGAAACTGCAGAAGATGACTTCCTAGGTTAA
Upstream 100 bases:
>100_bases ATATTACAAAGCCACAAGGCAAGCCAACTTTAGCAACTATAACAGATAAAAGGCCAGTTTATAATTCTGCTGAAGCAGAT TTTAAATAAAGAGGTATCTT
Downstream 100 bases:
>100_bases GGATTATGACTACACTTGCTATAGATGTTGAAACATATAGCAGTATAGATATTAAAACTTCGGGGGCCTACAAATATTGT GAGGCTCCTGATTTTGAAAT
Product: phage-associated protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MYMDYVEEEIQKENHYKEERLIMIKAKRTGTKVTTGKVRLSYAHLFEPHAIEGNEPKYSVSVIIPKTDTETLKAIKEATN EAKELGKSKWNGKVPATLKTPLRDGDTERPDDEAYANCYFLNANSKNKPGVVDKNVQPVLDATEVYSGCYARLTLNFYAY SASGNKGIACGLGNVQKLEDGEPLGGFTRAEDDFDSVETAEDDFLG
Sequences:
>Translated_206_residues MYMDYVEEEIQKENHYKEERLIMIKAKRTGTKVTTGKVRLSYAHLFEPHAIEGNEPKYSVSVIIPKTDTETLKAIKEATN EAKELGKSKWNGKVPATLKTPLRDGDTERPDDEAYANCYFLNANSKNKPGVVDKNVQPVLDATEVYSGCYARLTLNFYAY SASGNKGIACGLGNVQKLEDGEPLGGFTRAEDDFDSVETAEDDFLG >Mature_206_residues MYMDYVEEEIQKENHYKEERLIMIKAKRTGTKVTTGKVRLSYAHLFEPHAIEGNEPKYSVSVIIPKTDTETLKAIKEATN EAKELGKSKWNGKVPATLKTPLRDGDTERPDDEAYANCYFLNANSKNKPGVVDKNVQPVLDATEVYSGCYARLTLNFYAY SASGNKGIACGLGNVQKLEDGEPLGGFTRAEDDFDSVETAEDDFLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22917; Mature: 22917
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMDYVEEEIQKENHYKEERLIMIKAKRTGTKVTTGKVRLSYAHLFEPHAIEGNEPKYSV CCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECEEEEEEEHHCCCCCCCCCCCCEEE SVIIPKTDTETLKAIKEATNEAKELGKSKWNGKVPATLKTPLRDGDTERPDDEAYANCYF EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEE LNANSKNKPGVVDKNVQPVLDATEVYSGCYARLTLNFYAYSASGNKGIACGLGNVQKLED EECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEECCCCCCCCCC GEPLGGFTRAEDDFDSVETAEDDFLG CCCCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MYMDYVEEEIQKENHYKEERLIMIKAKRTGTKVTTGKVRLSYAHLFEPHAIEGNEPKYSV CCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECEEEEEEEHHCCCCCCCCCCCCEEE SVIIPKTDTETLKAIKEATNEAKELGKSKWNGKVPATLKTPLRDGDTERPDDEAYANCYF EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEE LNANSKNKPGVVDKNVQPVLDATEVYSGCYARLTLNFYAYSASGNKGIACGLGNVQKLED EECCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEECCCCCCCCCC GEPLGGFTRAEDDFDSVETAEDDFLG CCCCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA