Definition Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession NC_012563
Length 4,155,278

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The map label for this gene is yqbQ [H]

Identifier: 226949704

GI number: 226949704

Start: 2664768

End: 2665742

Strand: Reverse

Name: yqbQ [H]

Synonym: CLM_2644

Alternate gene names: 226949704

Gene position: 2665742-2664768 (Counterclockwise)

Preceding gene: 226949705

Following gene: 226949703

Centisome position: 64.15

GC content: 26.67

Gene sequence:

>975_bases
TTGAATATACAATTGTTACTGGATAATAAAGATGGGAATGTATTTGATATATCTGAATTAACAAACGAAGTTACTTGGAA
AACTAAAAGAAAAGATAAACCCTCTAGTTTGGATTTTGAAATATTAAAAGATAAGCAAATTACTATAAATAATGGTGATG
TAATAAGTTTTAAAGTAGATGGTAATCCAGTGTTTTATGGATATGCATTTGAAAATGGAGGAAGTAAAAATACAATTACA
AAAGTAACTGCTTATGATCAATTACGATATCTTTTATTTAATGATACTTATGTGTTTAAAAATAAAAAAGCAAGTCAAAT
TTTAATGCAAATTGCTAAAGATATAGGATTGAGAGTAGGAACTATAGAAGATACGGGATATGTCATACCACAGTTATTAG
AAGATGATAAAAAATTACTAGATATAATATATAGTTCTTTAGAAAAAACCCTAATGAATAATAAAAGAACTTATACATTA
TATGATGATTTTGGATATTTAAGCTTGAGAAATATAAATAACATGAGGCAACCTGTAGTTATTAGTGATGATAGTAACTT
AGGAGATTATGATTGGAAAAATAGTATAGATAGTGATACTTATAATAGAGTTAAAATAGTAAGAGATAATAAAGATACTA
AGGGCAGAGATGTTTATATAGCACAAGATAGTAGAAATATAGCTAAGTGGGGAAGGCTTCAATATTATAAAAAAGTAGAT
GAAAAAATGAACAAAGCACAAATTCAAGAAATGGTTAACGCCGCGCTAAAACTTAAGAATAGAGAAACTAAGACTTTAAA
ATTAAAAGATGTTATTAGCACAGATATAGCAGCGGATTTAAAATTAAGAGCTGGTAGTGGTGTGTATGTAGATATAAAAG
AAAAGGGAATAAAACAGTATTATCTTATAGAAGAAGCTACACATAAGTTCCAAAAAGGTAATTTAATAATGGATTTTGAT
TTAAAGGTGGTGTAG

Upstream 100 bases:

>100_bases
ATAAGTGGCCACAAATTTATAATCTAAATAAAGACAAAATTAAGAATCCTAATTTAATATATACAGGACAAGTTTTAAGG
CTTCCATAGGTGGTGATAGG

Downstream 100 bases:

>100_bases
TTATTAATAATGGGAATGATAGATACAATTAAAAAGGCAAGTATGGGAGCAGTTGGAGCTAGTAATCCAGTCAATATTTC
ATTTGGAGAAATAGTAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVDGNPVFYGYAFENGGSKNTIT
KVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVGTIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTL
YDDFGYLSLRNINNMRQPVVISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD
EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQYYLIEEATHKFQKGNLIMDFD
LKVV

Sequences:

>Translated_324_residues
MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVDGNPVFYGYAFENGGSKNTIT
KVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVGTIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTL
YDDFGYLSLRNINNMRQPVVISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD
EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQYYLIEEATHKFQKGNLIMDFD
LKVV
>Mature_324_residues
MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVDGNPVFYGYAFENGGSKNTIT
KVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVGTIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTL
YDDFGYLSLRNINNMRQPVVISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD
EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQYYLIEEATHKFQKGNLIMDFD
LKVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xkdQ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010277 [H]

Pfam domain/function: PF05954 Phage_GPD [H]

EC number: NA

Molecular weight: Translated: 37422; Mature: 37422

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVD
CEEEEEEECCCCCEEEHHHHCCHHEEEECCCCCCCCCCEEEECCCEEEECCCCEEEEEEC
GNPVFYGYAFENGGSKNTITKVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVG
CCEEEEEEEEECCCCCCCEEEEEEHHHEEEEEECCEEEECCCCHHHHHHHHHHHCCCEEE
TIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTLYDDFGYLSLRNINNMRQPVV
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCEE
ISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD
EECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQY
HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCEEEEEEECCCCEEEEECCCCCEEE
YLIEEATHKFQKGNLIMDFDLKVV
EEEHHHHHHHHCCCEEEEEEEEEC
>Mature Secondary Structure
MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVD
CEEEEEEECCCCCEEEHHHHCCHHEEEECCCCCCCCCCEEEECCCEEEECCCCEEEEEEC
GNPVFYGYAFENGGSKNTITKVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVG
CCEEEEEEEEECCCCCCCEEEEEEHHHEEEEEECCEEEECCCCHHHHHHHHHHHCCCEEE
TIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTLYDDFGYLSLRNINNMRQPVV
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCEE
ISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD
EECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQY
HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCEEEEEEECCCCEEEEECCCCCEEE
YLIEEATHKFQKGNLIMDFDLKVV
EEEHHHHHHHHCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]