| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is yqbQ [H]
Identifier: 226949704
GI number: 226949704
Start: 2664768
End: 2665742
Strand: Reverse
Name: yqbQ [H]
Synonym: CLM_2644
Alternate gene names: 226949704
Gene position: 2665742-2664768 (Counterclockwise)
Preceding gene: 226949705
Following gene: 226949703
Centisome position: 64.15
GC content: 26.67
Gene sequence:
>975_bases TTGAATATACAATTGTTACTGGATAATAAAGATGGGAATGTATTTGATATATCTGAATTAACAAACGAAGTTACTTGGAA AACTAAAAGAAAAGATAAACCCTCTAGTTTGGATTTTGAAATATTAAAAGATAAGCAAATTACTATAAATAATGGTGATG TAATAAGTTTTAAAGTAGATGGTAATCCAGTGTTTTATGGATATGCATTTGAAAATGGAGGAAGTAAAAATACAATTACA AAAGTAACTGCTTATGATCAATTACGATATCTTTTATTTAATGATACTTATGTGTTTAAAAATAAAAAAGCAAGTCAAAT TTTAATGCAAATTGCTAAAGATATAGGATTGAGAGTAGGAACTATAGAAGATACGGGATATGTCATACCACAGTTATTAG AAGATGATAAAAAATTACTAGATATAATATATAGTTCTTTAGAAAAAACCCTAATGAATAATAAAAGAACTTATACATTA TATGATGATTTTGGATATTTAAGCTTGAGAAATATAAATAACATGAGGCAACCTGTAGTTATTAGTGATGATAGTAACTT AGGAGATTATGATTGGAAAAATAGTATAGATAGTGATACTTATAATAGAGTTAAAATAGTAAGAGATAATAAAGATACTA AGGGCAGAGATGTTTATATAGCACAAGATAGTAGAAATATAGCTAAGTGGGGAAGGCTTCAATATTATAAAAAAGTAGAT GAAAAAATGAACAAAGCACAAATTCAAGAAATGGTTAACGCCGCGCTAAAACTTAAGAATAGAGAAACTAAGACTTTAAA ATTAAAAGATGTTATTAGCACAGATATAGCAGCGGATTTAAAATTAAGAGCTGGTAGTGGTGTGTATGTAGATATAAAAG AAAAGGGAATAAAACAGTATTATCTTATAGAAGAAGCTACACATAAGTTCCAAAAAGGTAATTTAATAATGGATTTTGAT TTAAAGGTGGTGTAG
Upstream 100 bases:
>100_bases ATAAGTGGCCACAAATTTATAATCTAAATAAAGACAAAATTAAGAATCCTAATTTAATATATACAGGACAAGTTTTAAGG CTTCCATAGGTGGTGATAGG
Downstream 100 bases:
>100_bases TTATTAATAATGGGAATGATAGATACAATTAAAAAGGCAAGTATGGGAGCAGTTGGAGCTAGTAATCCAGTCAATATTTC ATTTGGAGAAATAGTAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVDGNPVFYGYAFENGGSKNTIT KVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVGTIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTL YDDFGYLSLRNINNMRQPVVISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQYYLIEEATHKFQKGNLIMDFD LKVV
Sequences:
>Translated_324_residues MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVDGNPVFYGYAFENGGSKNTIT KVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVGTIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTL YDDFGYLSLRNINNMRQPVVISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQYYLIEEATHKFQKGNLIMDFD LKVV >Mature_324_residues MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVDGNPVFYGYAFENGGSKNTIT KVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVGTIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTL YDDFGYLSLRNINNMRQPVVISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQYYLIEEATHKFQKGNLIMDFD LKVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis xkdQ [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010277 [H]
Pfam domain/function: PF05954 Phage_GPD [H]
EC number: NA
Molecular weight: Translated: 37422; Mature: 37422
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVD CEEEEEEECCCCCEEEHHHHCCHHEEEECCCCCCCCCCEEEECCCEEEECCCCEEEEEEC GNPVFYGYAFENGGSKNTITKVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVG CCEEEEEEEEECCCCCCCEEEEEEHHHEEEEEECCEEEECCCCHHHHHHHHHHHCCCEEE TIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTLYDDFGYLSLRNINNMRQPVV EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCEE ISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD EECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQY HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCEEEEEEECCCCEEEEECCCCCEEE YLIEEATHKFQKGNLIMDFDLKVV EEEHHHHHHHHCCCEEEEEEEEEC >Mature Secondary Structure MNIQLLLDNKDGNVFDISELTNEVTWKTKRKDKPSSLDFEILKDKQITINNGDVISFKVD CEEEEEEECCCCCEEEHHHHCCHHEEEECCCCCCCCCCEEEECCCEEEECCCCEEEEEEC GNPVFYGYAFENGGSKNTITKVTAYDQLRYLLFNDTYVFKNKKASQILMQIAKDIGLRVG CCEEEEEEEEECCCCCCCEEEEEEHHHEEEEEECCEEEECCCCHHHHHHHHHHHCCCEEE TIEDTGYVIPQLLEDDKKLLDIIYSSLEKTLMNNKRTYTLYDDFGYLSLRNINNMRQPVV EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCCCCCEE ISDDSNLGDYDWKNSIDSDTYNRVKIVRDNKDTKGRDVYIAQDSRNIAKWGRLQYYKKVD EECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH EKMNKAQIQEMVNAALKLKNRETKTLKLKDVISTDIAADLKLRAGSGVYVDIKEKGIKQY HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCEEEEEEECCCCEEEEECCCCCEEE YLIEEATHKFQKGNLIMDFDLKVV EEEHHHHHHHHCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704261; 8969508; 9384377; 7489895 [H]