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The map label for this gene is 226949691

Identifier: 226949691

GI number: 226949691

Start: 2656559

End: 2657320

Strand: Reverse

Name: 226949691

Synonym: CLM_2631

Alternate gene names: NA

Gene position: 2657320-2656559 (Counterclockwise)

Preceding gene: 226949692

Following gene: 226949687

Centisome position: 63.95

GC content: 30.84

Gene sequence:

>762_bases
ATGAAAGTAGGAATAGATTGTGGTCATACATTAAGCGGTGATGATTATGGAGCAGTAGGAATAAAAGCAGAATCCAATCT
AACCAGAGAAGTAGGTACTAGAGTAATAAGTAAATTACAAGCTTTAGGGCATACAGTTATTAAGTGTTATAAGGATAGTT
GTTCAAGCTTAAATGATAGTTTAAGTTACAGAACTAATACAGCTAATAACAACAATGTAGATTTATATGTATCTATTCAT
TTTAATTGCTATAATGGTAGTGCTTATGGTACAGAAGTATTCACATATGGAGGGAAAGAATTACAACAAGCTAGAGTAGT
ATTAAACAATATTTGTTCATTAGGATATACAAATAGAGGTTTAAAAGATGGAAGTAATTTATATGTATTAAGACATACAA
AAGCTAAAGCTATGCTAATAGAATGTTGTTTCTGTGATAATGCAGGAGATATGAACAGATATAATGCTGAAAATATGGCT
AATGCTATTGTTAAAGGACTAGTAGGGAAAACTACAAGCAATAGCACACCAAGCGAACCAACAAATAACAATAATAGTTG
GATTAATTTAGATGGAAGAACAGGTACAATAAATACACCAAGCGGTGTAAATGTTAGAGAAAAGAAATCAACTTCTAGCA
GAATATTAGGTGCTTTACCTAATAGTTCAAAGGTTAACTTATATCGTAAAGAAGGAGATTGGATACATATATATTATCCA
CCACATGGGGGTTATGTGTATGCTAAATATGTAAGATATTAA

Upstream 100 bases:

>100_bases
TTTACTTTGGACAAAGTTCAGCTAGGCAAGCAGTAAAAGAAAGTAAAGAGCAGGATTAATGCCTGTTCTTTTTTTATATT
AAATTTTAGGAGGTATTTAT

Downstream 100 bases:

>100_bases
GTTTTAGAGGTATTTTCCTTCATGGAAATACCTTTTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTAGTCATTG
CTATACAATGCTTTAGGGTA

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKVGIDCGHTLSGDDYGAVGIKAESNLTREVGTRVISKLQALGHTVIKCYKDSCSSLNDSLSYRTNTANNNNVDLYVSIH
FNCYNGSAYGTEVFTYGGKELQQARVVLNNICSLGYTNRGLKDGSNLYVLRHTKAKAMLIECCFCDNAGDMNRYNAENMA
NAIVKGLVGKTTSNSTPSEPTNNNNSWINLDGRTGTINTPSGVNVREKKSTSSRILGALPNSSKVNLYRKEGDWIHIYYP
PHGGYVYAKYVRY

Sequences:

>Translated_253_residues
MKVGIDCGHTLSGDDYGAVGIKAESNLTREVGTRVISKLQALGHTVIKCYKDSCSSLNDSLSYRTNTANNNNVDLYVSIH
FNCYNGSAYGTEVFTYGGKELQQARVVLNNICSLGYTNRGLKDGSNLYVLRHTKAKAMLIECCFCDNAGDMNRYNAENMA
NAIVKGLVGKTTSNSTPSEPTNNNNSWINLDGRTGTINTPSGVNVREKKSTSSRILGALPNSSKVNLYRKEGDWIHIYYP
PHGGYVYAKYVRY
>Mature_253_residues
MKVGIDCGHTLSGDDYGAVGIKAESNLTREVGTRVISKLQALGHTVIKCYKDSCSSLNDSLSYRTNTANNNNVDLYVSIH
FNCYNGSAYGTEVFTYGGKELQQARVVLNNICSLGYTNRGLKDGSNLYVLRHTKAKAMLIECCFCDNAGDMNRYNAENMA
NAIVKGLVGKTTSNSTPSEPTNNNNSWINLDGRTGTINTPSGVNVREKKSTSSRILGALPNSSKVNLYRKEGDWIHIYYP
PHGGYVYAKYVRY

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.perfringens pIP404 ORF10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 27799; Mature: 27799

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGIDCGHTLSGDDYGAVGIKAESNLTREVGTRVISKLQALGHTVIKCYKDSCSSLNDS
CEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSYRTNTANNNNVDLYVSIHFNCYNGSAYGTEVFTYGGKELQQARVVLNNICSLGYTNRG
CEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
LKDGSNLYVLRHTKAKAMLIECCFCDNAGDMNRYNAENMANAIVKGLVGKTTSNSTPSEP
CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
TNNNNSWINLDGRTGTINTPSGVNVREKKSTSSRILGALPNSSKVNLYRKEGDWIHIYYP
CCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCEEEEEEECCCEEEEEEC
PHGGYVYAKYVRY
CCCCEEEEEEECC
>Mature Secondary Structure
MKVGIDCGHTLSGDDYGAVGIKAESNLTREVGTRVISKLQALGHTVIKCYKDSCSSLNDS
CEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LSYRTNTANNNNVDLYVSIHFNCYNGSAYGTEVFTYGGKELQQARVVLNNICSLGYTNRG
CEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
LKDGSNLYVLRHTKAKAMLIECCFCDNAGDMNRYNAENMANAIVKGLVGKTTSNSTPSEP
CCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
TNNNNSWINLDGRTGTINTPSGVNVREKKSTSSRILGALPNSSKVNLYRKEGDWIHIYYP
CCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCEEEEEEECCCEEEEEEC
PHGGYVYAKYVRY
CCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8052128; 11792842 [H]