Click here to switch to the map view.

The map label for this gene is yqaM [H]

Identifier: 226949686

GI number: 226949686

Start: 2652776

End: 2653585

Strand: Reverse

Name: yqaM [H]

Synonym: CLM_2626

Alternate gene names: 226949686

Gene position: 2653585-2652776 (Counterclockwise)

Preceding gene: 226949687

Following gene: 226949685

Centisome position: 63.86

GC content: 26.67

Gene sequence:

>810_bases
ATGACACTAAAAACGAGCATAAACAGAATAATGGAGGAGATAAAGAATCAAAGAGAAAATGGTCTGGGTATAAACCACCA
AAACCTAAATTACAAAGAGATAGAAAATGTAAGGGACTCATATAAAGAAGTTTGTAATAAATGCGGTGGTAGTACATGGA
TAACTAATATAGATAAAGAAGGTAGAATTTATTGCAGAAGGTGTAGCTGCTATGAAATGCAAAGGGCTAAAGATATGTGG
AATTTAGCAGGAATAAATACAGAGCAATCTAAACATACCTTTTCAAACTATAAACCCTATAATGAAACAACTGAATTAGC
AAAGAATACAGCCATTCAATATTATAAAAATTTTGATGAAATCAAAAATACAAGACAAAATAGTATTGCTTTTATAGGGC
AAGTGGGTAGTGGCAAAACTCATTTAAGTATAGCTTTAGCTGTAAATTTTTTAAGAAATAAACAAATTTCAGTTATATAT
ATGCCTTATAGAAATACTATAACAAAAATAAAACAAAATATGATAGATGAAAAATATTATAGTAAGGTTTTATCAAAGTA
CCAAAAGGCAAAGATTCTTCTTATAGATGATTTATTTAAAGGTAAAATAAATGAATCTGATACAAATATAATGTTTGAAA
TAATTAATTATAGATATATAAATTATTTACCTATGATAGTTAGTTCTGAATTTACTGTAGAAAGGCTCCTAGATTTTGAT
GAAGCTATAGGAAGTAGAATAATTGAAATGGCAAAGGATTATACTGTTGAAATAGTTGGAAAGGAAAATAATTATAGATT
AAAAATTTGA

Upstream 100 bases:

>100_bases
TTTGGTAAACATACTTATAAGTATATTAAGGGGATTTTAGAAAACTGGAAAATAAATGGGGGTGTTATGGAAAATAAGAA
GGTAAAAGGTGGCGATTTTG

Downstream 100 bases:

>100_bases
TATTTAATAAGCATTGTAGGATTCCCAGTAACGATTAGTGTATATCTTTTAGCTAGAATTGAAAAAAAGTTTGATGATTT
AATTAAAGCTTTTAATGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTLKTSINRIMEEIKNQRENGLGINHQNLNYKEIENVRDSYKEVCNKCGGSTWITNIDKEGRIYCRRCSCYEMQRAKDMW
NLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDEIKNTRQNSIAFIGQVGSGKTHLSIALAVNFLRNKQISVIY
MPYRNTITKIKQNMIDEKYYSKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYINYLPMIVSSEFTVERLLDFD
EAIGSRIIEMAKDYTVEIVGKENNYRLKI

Sequences:

>Translated_269_residues
MTLKTSINRIMEEIKNQRENGLGINHQNLNYKEIENVRDSYKEVCNKCGGSTWITNIDKEGRIYCRRCSCYEMQRAKDMW
NLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDEIKNTRQNSIAFIGQVGSGKTHLSIALAVNFLRNKQISVIY
MPYRNTITKIKQNMIDEKYYSKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYINYLPMIVSSEFTVERLLDFD
EAIGSRIIEMAKDYTVEIVGKENNYRLKI
>Mature_268_residues
TLKTSINRIMEEIKNQRENGLGINHQNLNYKEIENVRDSYKEVCNKCGGSTWITNIDKEGRIYCRRCSCYEMQRAKDMWN
LAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDEIKNTRQNSIAFIGQVGSGKTHLSIALAVNFLRNKQISVIYM
PYRNTITKIKQNMIDEKYYSKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYINYLPMIVSSEFTVERLLDFDE
AIGSRIIEMAKDYTVEIVGKENNYRLKI

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqxC and T.hyodysenteriae hemolysin tlyA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 31593; Mature: 31461

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKTSINRIMEEIKNQRENGLGINHQNLNYKEIENVRDSYKEVCNKCGGSTWITNIDKE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GRIYCRRCSCYEMQRAKDMWNLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDE
CCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IKNTRQNSIAFIGQVGSGKTHLSIALAVNFLRNKQISVIYMPYRNTITKIKQNMIDEKYY
HHCCCCCCEEEEEECCCCCHHEEHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
SKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYINYLPMIVSSEFTVERLLDFD
HHHHHHHHHCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EAIGSRIIEMAKDYTVEIVGKENNYRLKI
HHHHHHHHHHHCCCEEEEEECCCCEEEEC
>Mature Secondary Structure 
TLKTSINRIMEEIKNQRENGLGINHQNLNYKEIENVRDSYKEVCNKCGGSTWITNIDKE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GRIYCRRCSCYEMQRAKDMWNLAGINTEQSKHTFSNYKPYNETTELAKNTAIQYYKNFDE
CCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
IKNTRQNSIAFIGQVGSGKTHLSIALAVNFLRNKQISVIYMPYRNTITKIKQNMIDEKYY
HHCCCCCCEEEEEECCCCCHHEEHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHH
SKVLSKYQKAKILLIDDLFKGKINESDTNIMFEIINYRYINYLPMIVSSEFTVERLLDFD
HHHHHHHHHCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EAIGSRIIEMAKDYTVEIVGKENNYRLKI
HHHHHHHHHHHCCCEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]