Click here to switch to the map view.

The map label for this gene is 226949588

Identifier: 226949588

GI number: 226949588

Start: 2583760

End: 2584374

Strand: Reverse

Name: 226949588

Synonym: CLM_2525

Alternate gene names: NA

Gene position: 2584374-2583760 (Counterclockwise)

Preceding gene: 226949589

Following gene: 226949587

Centisome position: 62.19

GC content: 27.32

Gene sequence:

>615_bases
ATGGCACATATAAAAGATATTATAGGAGAAGAAGCATTCAATGCTCTTTCAGAAGATAAAAGAAAAGAATTAGATAAAAA
AGATTTTGAAGATGTTTCAAGTGGTTCATTCATTTCAAAAACTAGATTTGATCAGGTAAATGAACAGGCAAAGGAATATA
AAAAACAAGTTGGTGAAAGAGATAAACAAATAAATAATTTAAAAGAAGAATATAAAGATGTTGATGGATTGAAAGAAAAA
GTTGAGCAATTAGAATTAGATAATAAAACACAAAAAGAAACTTATGAGAAACAATTATCAGATATAGCTTTTAATAATGC
CTTAGAAAAAGGTTTAGGGGCTTTTAGTATTAAGGATAAAAAGTTAATTATGACACTTATAGACAAAGATAAGCTTAAGG
TAGATGGAGATAATGTCATAGGTCTTAAAGAACAAATAGAGCCACTTAAAACAAGTCATGAATATTTATTTGATAAAGAA
ATAAAAGGCACAGGATCATTTGTTACTGGTGGTAATAATGATACACAGCCAAATAAAACTAACTTTGCTTCAGAATTAGG
AAAGCAAAGAGCAGAAAATATGAAAGCAAAAAGTTTAACAGACTTTGCTAAATAA

Upstream 100 bases:

>100_bases
ATTTATGTCAGAACCATATAAAATAGAAAAATAAAAGCACTTACTAAGTAAAAATAGTAGGTGCTTTTATTATGCCTAAG
ATTAAGGAGGAAAAGAAAGA

Downstream 100 bases:

>100_bases
AAATAAAGGAGGAATGTATTTTGAGACAATCAAGCTATACAATAGGTGCTAAACAAAATAAATTAAGATTAATAGCTGGA
GATCATTTTATTTCATTGCC

Product: phage scaffold protein

Products: NA

Alternate protein names: Scaffold Protein; Scaffold Protein Gp; Phage-Like Protein; Phage Minor Protein GP; Minor Capsid Protein R; Scaffolding Protein; Phage Minor GP

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MAHIKDIIGEEAFNALSEDKRKELDKKDFEDVSSGSFISKTRFDQVNEQAKEYKKQVGERDKQINNLKEEYKDVDGLKEK
VEQLELDNKTQKETYEKQLSDIAFNNALEKGLGAFSIKDKKLIMTLIDKDKLKVDGDNVIGLKEQIEPLKTSHEYLFDKE
IKGTGSFVTGGNNDTQPNKTNFASELGKQRAENMKAKSLTDFAK

Sequences:

>Translated_204_residues
MAHIKDIIGEEAFNALSEDKRKELDKKDFEDVSSGSFISKTRFDQVNEQAKEYKKQVGERDKQINNLKEEYKDVDGLKEK
VEQLELDNKTQKETYEKQLSDIAFNNALEKGLGAFSIKDKKLIMTLIDKDKLKVDGDNVIGLKEQIEPLKTSHEYLFDKE
IKGTGSFVTGGNNDTQPNKTNFASELGKQRAENMKAKSLTDFAK
>Mature_203_residues
AHIKDIIGEEAFNALSEDKRKELDKKDFEDVSSGSFISKTRFDQVNEQAKEYKKQVGERDKQINNLKEEYKDVDGLKEKV
EQLELDNKTQKETYEKQLSDIAFNNALEKGLGAFSIKDKKLIMTLIDKDKLKVDGDNVIGLKEQIEPLKTSHEYLFDKEI
KGTGSFVTGGNNDTQPNKTNFASELGKQRAENMKAKSLTDFAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23218; Mature: 23087

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIKDIIGEEAFNALSEDKRKELDKKDFEDVSSGSFISKTRFDQVNEQAKEYKKQVGER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DKQINNLKEEYKDVDGLKEKVEQLELDNKTQKETYEKQLSDIAFNNALEKGLGAFSIKDK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KLIMTLIDKDKLKVDGDNVIGLKEQIEPLKTSHEYLFDKEIKGTGSFVTGGNNDTQPNKT
HHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHH
NFASELGKQRAENMKAKSLTDFAK
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHIKDIIGEEAFNALSEDKRKELDKKDFEDVSSGSFISKTRFDQVNEQAKEYKKQVGER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DKQINNLKEEYKDVDGLKEKVEQLELDNKTQKETYEKQLSDIAFNNALEKGLGAFSIKDK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KLIMTLIDKDKLKVDGDNVIGLKEQIEPLKTSHEYLFDKEIKGTGSFVTGGNNDTQPNKT
HHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHH
NFASELGKQRAENMKAKSLTDFAK
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA