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The map label for this gene is 226949560

Identifier: 226949560

GI number: 226949560

Start: 2564847

End: 2565212

Strand: Reverse

Name: 226949560

Synonym: CLM_2496

Alternate gene names: NA

Gene position: 2565212-2564847 (Counterclockwise)

Preceding gene: 226949561

Following gene: 226949559

Centisome position: 61.73

GC content: 22.95

Gene sequence:

>366_bases
TTGATGGGATTTTTATTGGGATTTTCTGATGAAAAAGTAGTTATAAGAATTAAAGAAAATAATGGAGACAAAATATTAAT
TAAGTATTTTATAAAACCTATAATAGCAGGAATTATTATTGTTATTATGTCTTTAGTCTTGGAAATGATATATGGGCAAA
ATATTTCTAATATTTCACAAAGAGTATATATTCTTATATCAGTTATATGGTCTGTTCTATGTGTTCTATTTTTATCTTCA
ACTTTTAGAGTAAGTTTGCTTATGTATTTAATACTAACAAAAATATTTGATGAAGCTGATAATAAAGGAATAAATACTAA
TGAAAAGGGAAATGTAACGTTTGATAATCCAGAAGATATTTATTAA

Upstream 100 bases:

>100_bases
ATTATATTTTAAATTTGAGATAAACAAATTAAAACATTATGAACAACTTTTTTCCAACACAATAACTTTTGTTTCCATTC
TAATAGGGGTATTAATGTCG

Downstream 100 bases:

>100_bases
AATATCCAGTACCTTATTTTACTCATATAAATACTAACATTATGCTAAAGCTTATATAAGTAATATCTAGAAACTTTAAG
TTTAAACTTTAGAGTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MMGFLLGFSDEKVVIRIKENNGDKILIKYFIKPIIAGIIIVIMSLVLEMIYGQNISNISQRVYILISVIWSVLCVLFLSS
TFRVSLLMYLILTKIFDEADNKGINTNEKGNVTFDNPEDIY

Sequences:

>Translated_121_residues
MMGFLLGFSDEKVVIRIKENNGDKILIKYFIKPIIAGIIIVIMSLVLEMIYGQNISNISQRVYILISVIWSVLCVLFLSS
TFRVSLLMYLILTKIFDEADNKGINTNEKGNVTFDNPEDIY
>Mature_121_residues
MMGFLLGFSDEKVVIRIKENNGDKILIKYFIKPIIAGIIIVIMSLVLEMIYGQNISNISQRVYILISVIWSVLCVLFLSS
TFRVSLLMYLILTKIFDEADNKGINTNEKGNVTFDNPEDIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13815; Mature: 13815

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGFLLGFSDEKVVIRIKENNGDKILIKYFIKPIIAGIIIVIMSLVLEMIYGQNISNISQ
CCCCEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RVYILISVIWSVLCVLFLSSTFRVSLLMYLILTKIFDEADNKGINTNEKGNVTFDNPEDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC
Y
C
>Mature Secondary Structure
MMGFLLGFSDEKVVIRIKENNGDKILIKYFIKPIIAGIIIVIMSLVLEMIYGQNISNISQ
CCCCEECCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RVYILISVIWSVLCVLFLSSTFRVSLLMYLILTKIFDEADNKGINTNEKGNVTFDNPEDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA