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The map label for this gene is 226949557

Identifier: 226949557

GI number: 226949557

Start: 2561916

End: 2562239

Strand: Reverse

Name: 226949557

Synonym: CLM_2493

Alternate gene names: NA

Gene position: 2562239-2561916 (Counterclockwise)

Preceding gene: 226949559

Following gene: 226949556

Centisome position: 61.66

GC content: 27.16

Gene sequence:

>324_bases
ATGTATAGTAAAAATATAGCTAATAGTTATATACCTAATTATCTAAATAGATATATACAAGCTAAAAAAGGAAATTTAGA
TCTTTTGAAGAATAATTACATATACTGGAATGAGGTGGTATATGTGGTTAAAAATCGGCTTAAAGAAATAAGAATGAGAG
AATATCTGATGGATCAAAAAGCATTTGCAGAAATGCTTGGAATTAAAAAAAGCACTTATAACACAATAGAATTAAATAAA
GTTCAAGGTAATGCGGAAACATTATTAACTATAGCTAAAGCACTTAATCGAAAGGTAGAGGATATTTGGTACCTAGAAGA
TTAG

Upstream 100 bases:

>100_bases
ATTTTTAGTTGGGTGTTCTTTTAAACATAGTTATATATTCAAATATAACATAAACAACATTATATATAGCTTTATGAATA
ATTAGTTACACTATCTATTT

Downstream 100 bases:

>100_bases
GTGCTTTTTTTATATATTTAAATACTAAAAATGGGATTAAAAATAAATTATTAAATTAAATCCTAAAATTAGGAAACTTT
TACACAAAAGGTGCATAGTA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MYSKNIANSYIPNYLNRYIQAKKGNLDLLKNNYIYWNEVVYVVKNRLKEIRMREYLMDQKAFAEMLGIKKSTYNTIELNK
VQGNAETLLTIAKALNRKVEDIWYLED

Sequences:

>Translated_107_residues
MYSKNIANSYIPNYLNRYIQAKKGNLDLLKNNYIYWNEVVYVVKNRLKEIRMREYLMDQKAFAEMLGIKKSTYNTIELNK
VQGNAETLLTIAKALNRKVEDIWYLED
>Mature_107_residues
MYSKNIANSYIPNYLNRYIQAKKGNLDLLKNNYIYWNEVVYVVKNRLKEIRMREYLMDQKAFAEMLGIKKSTYNTIELNK
VQGNAETLLTIAKALNRKVEDIWYLED

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12777; Mature: 12777

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKNIANSYIPNYLNRYIQAKKGNLDLLKNNYIYWNEVVYVVKNRLKEIRMREYLMDQK
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAEMLGIKKSTYNTIELNKVQGNAETLLTIAKALNRKVEDIWYLED
HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHEECCC
>Mature Secondary Structure
MYSKNIANSYIPNYLNRYIQAKKGNLDLLKNNYIYWNEVVYVVKNRLKEIRMREYLMDQK
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAEMLGIKKSTYNTIELNKVQGNAETLLTIAKALNRKVEDIWYLED
HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA