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The map label for this gene is bioY [H]

Identifier: 226949533

GI number: 226949533

Start: 2545467

End: 2546027

Strand: Reverse

Name: bioY [H]

Synonym: CLM_2469

Alternate gene names: 226949533

Gene position: 2546027-2545467 (Counterclockwise)

Preceding gene: 226949534

Following gene: 226949532

Centisome position: 61.27

GC content: 29.77

Gene sequence:

>561_bases
ATGAGACAGTCTAAAACATTGACAATGTCAAGATGTGCTTTGTTTACAGCTTTAGTAGCAATTAGTGCATACATTCAAAT
CCCAGTACCCTTTATGGATTATTTCACATTACAATTTTTCTTTGTACTTTTGGCAGGTATGATTTTAGGAAAAAAACAGG
GGGCAATTTCAGTTGGACTTTATGTTTTAATAGGACTTTTAGGAGTGCCTGTCTTTGCAGCAGGTGGCGGAATAGGATAT
ATATTTAAACCAAGCTTTGGGTATCTGTTAGGTTTTATAGTAACTTCTTATGCTGTTGGATATACAATTAAAAAAATAAA
TGCAAAAAGATTTGGAGCATATTTAATATCAGCTTTTGTAGGATTCATAATAACTTATGCTATTGGATTAACATATAAAT
TTTTAATACTGAATTTATACTTAAAAACTCCAACAAACTTTATGATTATTTTTTTATCTTGTTTTCCATTAGACATGCCT
GGTGACATATTTCTATGCATAATGAGTGCATTATTTGCTAATAAAATTAACCCAATTTTAAGGAGAGAAAGAAATGAGTA
A

Upstream 100 bases:

>100_bases
AAAGCATTGTCAACTTTTTTAAAAAAATAAGTTGACAATGCTTTTTTATATGATTATAATCTATAAATAAAATATGATAA
TTTCAAAGGAGAACTAAATA

Downstream 100 bases:

>100_bases
TATAATTAAATATAAGAAAAAAATTTTAAATGGAGATTTACTAACAAAAGAAGAAGTAGAAGAGCTTTTAGAGGAAGATA
TTATAGATCTTGCAGCAACA

Product: BioY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRQSKTLTMSRCALFTALVAISAYIQIPVPFMDYFTLQFFFVLLAGMILGKKQGAISVGLYVLIGLLGVPVFAAGGGIGY
IFKPSFGYLLGFIVTSYAVGYTIKKINAKRFGAYLISAFVGFIITYAIGLTYKFLILNLYLKTPTNFMIIFLSCFPLDMP
GDIFLCIMSALFANKINPILRRERNE

Sequences:

>Translated_186_residues
MRQSKTLTMSRCALFTALVAISAYIQIPVPFMDYFTLQFFFVLLAGMILGKKQGAISVGLYVLIGLLGVPVFAAGGGIGY
IFKPSFGYLLGFIVTSYAVGYTIKKINAKRFGAYLISAFVGFIITYAIGLTYKFLILNLYLKTPTNFMIIFLSCFPLDMP
GDIFLCIMSALFANKINPILRRERNE
>Mature_186_residues
MRQSKTLTMSRCALFTALVAISAYIQIPVPFMDYFTLQFFFVLLAGMILGKKQGAISVGLYVLIGLLGVPVFAAGGGIGY
IFKPSFGYLLGFIVTSYAVGYTIKKINAKRFGAYLISAFVGFIITYAIGLTYKFLILNLYLKTPTNFMIIFLSCFPLDMP
GDIFLCIMSALFANKINPILRRERNE

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 20661; Mature: 20661

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSKTLTMSRCALFTALVAISAYIQIPVPFMDYFTLQFFFVLLAGMILGKKQGAISVGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YVLIGLLGVPVFAAGGGIGYIFKPSFGYLLGFIVTSYAVGYTIKKINAKRFGAYLISAFV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFIITYAIGLTYKFLILNLYLKTPTNFMIIFLSCFPLDMPGDIFLCIMSALFANKINPIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEEECCCCCCCCHHHHHHHHHHHHHHCCHHH
RRERNE
HCCCCC
>Mature Secondary Structure
MRQSKTLTMSRCALFTALVAISAYIQIPVPFMDYFTLQFFFVLLAGMILGKKQGAISVGL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YVLIGLLGVPVFAAGGGIGYIFKPSFGYLLGFIVTSYAVGYTIKKINAKRFGAYLISAFV
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFIITYAIGLTYKFLILNLYLKTPTNFMIIFLSCFPLDMPGDIFLCIMSALFANKINPIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHEEECCCCCCCCHHHHHHHHHHHHHHCCHHH
RRERNE
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2110099; 2507401 [H]