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The map label for this gene is thiW

Identifier: 226949526

GI number: 226949526

Start: 2540785

End: 2541354

Strand: Reverse

Name: thiW

Synonym: CLM_2461

Alternate gene names: NA

Gene position: 2541354-2540785 (Counterclockwise)

Preceding gene: 226949527

Following gene: 226949525

Centisome position: 61.16

GC content: 34.74

Gene sequence:

>570_bases
ATGGAGAAAAACTCAAAACTATTAAAGAAACTTATGTTAGCAATGATTGTGGCAATGGGAGTTGTAATTTCACCAATTCT
TCGTATTGAGGGAATGTGCCCTATGGCCCATTTTATTAACATTTTATGTTCTGTTATCCTTGGACCCTGGTATTCACTGC
TTTGTGCTACATTGATTGGTGTAATAAGAATGTTTTTTATGGGGATTCCACCTTTAGCTTTAACTGGAGCGGTTTTTGGG
GCATTTTTGTCTGGAGTTTCATATAGAGTATCTAAGGGAAAGTTAATTTGTGCTATTGTAGGTGAAGTTATAGGAACTGG
TGTTATAGGCGCCATACTTTCATATCCTATTATGACATTTATTTGGGGCAGAACAGGTCTTACATGGATGTTTTATGTTC
CTTCATTTATTATGGCTACGCTTATTGGAGGAACGATTGCATTTATTTTTCTAGGAGCATTAAGTAGGACAGGTAATCTT
GCAAAAATTCAAAGAAGTTTGGGGGCAAAAGTTTATGATAAACCAAGAGTTAATAATAAACAAATTATTGCAAATAAGAC
AGAGTGTTAA

Upstream 100 bases:

>100_bases
AAACTGCTATTTGGTTACACTAAAATCATACCTCAATAATGGTGTTTATTTCCTATATGACATATTGGGAAATTTAATGT
TATTAAGGAGGTATTTTATT

Downstream 100 bases:

>100_bases
ATTTAAAAAACCTCTCATTCACTATATTACAAACCCAATTTCAATAAATGATTGTGCAAATATGATTCTTGCTGTTGGTG
CAAAGCCTATTATGGCCGAG

Product: thiW protein

Products: NA

Alternate protein names: Hydroxyethylthiazole Permease; Thiazole Transporter ThiW; Integral Membrane Protein; Protein ThiW

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MEKNSKLLKKLMLAMIVAMGVVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFG
AFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWMFYVPSFIMATLIGGTIAFIFLGALSRTGNL
AKIQRSLGAKVYDKPRVNNKQIIANKTEC

Sequences:

>Translated_189_residues
MEKNSKLLKKLMLAMIVAMGVVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFG
AFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWMFYVPSFIMATLIGGTIAFIFLGALSRTGNL
AKIQRSLGAKVYDKPRVNNKQIIANKTEC
>Mature_189_residues
MEKNSKLLKKLMLAMIVAMGVVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIGVIRMFFMGIPPLALTGAVFG
AFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTFIWGRTGLTWMFYVPSFIMATLIGGTIAFIFLGALSRTGNL
AKIQRSLGAKVYDKPRVNNKQIIANKTEC

Specific function: Unknown

COG id: COG4732

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20469; Mature: 20469

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNSKLLKKLMLAMIVAMGVVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRMFFMGIPPLALTGAVFGAFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGRTGLTWMFYVPSFIMATLIGGTIAFIFLGALSRTGNLAKIQRSLGAKVYDKPRVNNK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
QIIANKTEC
EECCCCCCC
>Mature Secondary Structure
MEKNSKLLKKLMLAMIVAMGVVISPILRIEGMCPMAHFINILCSVILGPWYSLLCATLIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRMFFMGIPPLALTGAVFGAFLSGVSYRVSKGKLICAIVGEVIGTGVIGAILSYPIMTF
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IWGRTGLTWMFYVPSFIMATLIGGTIAFIFLGALSRTGNLAKIQRSLGAKVYDKPRVNNK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
QIIANKTEC
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA