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The map label for this gene is yybA [H]

Identifier: 226949512

GI number: 226949512

Start: 2529286

End: 2529750

Strand: Reverse

Name: yybA [H]

Synonym: CLM_2447

Alternate gene names: 226949512

Gene position: 2529750-2529286 (Counterclockwise)

Preceding gene: 226949514

Following gene: 226949511

Centisome position: 60.88

GC content: 26.45

Gene sequence:

>465_bases
ATGAGTTATTTAATTCTTAGAGAAATTGGGATGATTGCAAGATGTCTTCAGACAATCAGTGATGTAGAATTTAGAGAGAT
AGGCTTAGAAAAAGGTCAATATATGTTTTTAGTAAGAATATGTGAAAATCCAGGAATAAATCAAGAAACACTATCTAATA
TGTTAAAAGTAGATAGAACAACAACAGCAAAAGCAATAAAAAAATTAGTTGAAAGTGATTATGTTATTAAAAAGAATGAT
GTAGAGGATAAAAGATCATTCAAACTTTATCCATCTGAAAGATCAATAGGGATTTATTCATTTTTATGTGGAGAAGAAAA
ATTTTCTACAGATAATTCATTAAAGGGATTTAGTGATGAAGAAAAAGAGATACTTCACAATCTCCTAGAACGAATGAGAA
AAAATATTGAAAAAGATTGGAAAATTATAAAAAAAGGAGAGAAAAGAAATTATTTAGATAGCTAA

Upstream 100 bases:

>100_bases
TATTTCGGGACCGCTTTAAATTAAATAACTTGAACTCTCAACAAAAAAGTGCTAGAATGAATTTACTTGAAAGTTCAAGT
AAATTTCGGAAGGTGATATT

Downstream 100 bases:

>100_bases
AGGAGAAGTAATTATGGAATGGAAGCTGAAAAAGTTTAAAGAATTAAGTGTAGAAGAAATGTATGAAATTTTAAGAGTTA
GGGACCAAGTGTTTATTGTA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSYLILREIGMIARCLQTISDVEFREIGLEKGQYMFLVRICENPGINQETLSNMLKVDRTTTAKAIKKLVESDYVIKKND
VEDKRSFKLYPSERSIGIYSFLCGEEKFSTDNSLKGFSDEEKEILHNLLERMRKNIEKDWKIIKKGEKRNYLDS

Sequences:

>Translated_154_residues
MSYLILREIGMIARCLQTISDVEFREIGLEKGQYMFLVRICENPGINQETLSNMLKVDRTTTAKAIKKLVESDYVIKKND
VEDKRSFKLYPSERSIGIYSFLCGEEKFSTDNSLKGFSDEEKEILHNLLERMRKNIEKDWKIIKKGEKRNYLDS
>Mature_153_residues
SYLILREIGMIARCLQTISDVEFREIGLEKGQYMFLVRICENPGINQETLSNMLKVDRTTTAKAIKKLVESDYVIKKNDV
EDKRSFKLYPSERSIGIYSFLCGEEKFSTDNSLKGFSDEEKEILHNLLERMRKNIEKDWKIIKKGEKRNYLDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18071; Mature: 17940

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLILREIGMIARCLQTISDVEFREIGLEKGQYMFLVRICENPGINQETLSNMLKVDRT
CCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCH
TTAKAIKKLVESDYVIKKNDVEDKRSFKLYPSERSIGIYSFLCGEEKFSTDNSLKGFSDE
HHHHHHHHHHHCCCEEECCCCCCCCCEECCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCH
EKEILHNLLERMRKNIEKDWKIIKKGEKRNYLDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SYLILREIGMIARCLQTISDVEFREIGLEKGQYMFLVRICENPGINQETLSNMLKVDRT
CHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCH
TTAKAIKKLVESDYVIKKNDVEDKRSFKLYPSERSIGIYSFLCGEEKFSTDNSLKGFSDE
HHHHHHHHHHHCCCEEECCCCCCCCCEECCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCH
EKEILHNLLERMRKNIEKDWKIIKKGEKRNYLDS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]