Click here to switch to the map view.

The map label for this gene is 226949225

Identifier: 226949225

GI number: 226949225

Start: 2198062

End: 2198838

Strand: Reverse

Name: 226949225

Synonym: CLM_2144

Alternate gene names: NA

Gene position: 2198838-2198062 (Counterclockwise)

Preceding gene: 226949226

Following gene: 226949224

Centisome position: 52.92

GC content: 25.87

Gene sequence:

>777_bases
ATGAAAGAGTTAATCATTAGCGAATTTTTAAGAATGAGAGGAAGAAAAAAGAATAGAGCTTCTTTTATTCTAATTTTAGT
TAATTTTATATTTAGTATTTCTTGGTATAAAACCTTTGGAGAAGGTACGGGTGTCTATACTCCAGGTATATCTACTAAGA
TAAATTCTCTGAATTTACCTATTTTTGTAATGAAAGATTTAGCATTAATTCTATTTTTAATAGTTCTTCCAATGCTTTTT
ATAGATAGTTTAAGTGGAGAGTATGAATCTGGTGCGTATAGACTTATATTAATAAGACCCTATAGTAAAGTTAAGCTATG
GTTTTCTAAGTTGATAGTTCAAAGTTTATTTTCATTAGTTATATTTGTTGTATTTTTTATTATTTCTGTAATTAGCGGCT
ATATTTTATTCCCTAAGGTAACTATAACTAACTTTTACAATATACCTAAAGTTTATGATAAATTAGGAGCTTTTATATAT
AATTTTAAAGTTGTAGCACTGATGTACTTTGTAAGTATTGCAATTTTAGCTTTAGCTTCTTTAATTTCCTTAATAGTGTC
TAAGTGTGTGGCGGCCTTTTTAATTGTTATATCTTTCTTAATAGCAGGGATATATATAGGACATGGATTACAAGTTATAT
TTTTGCCTTTTCATAATATAATTAAAGTTTTAAGTTTAGGAAAAAGAGCTGATTTTTATATACCAGTTGTATCCTGTTTA
CTTATATGCAGCTTTTTAAGTACATTGATTTTTATTAGGAAAGATTTGAAATGTTAA

Upstream 100 bases:

>100_bases
TTATTCTATATCTAAAAAGATTCTTATTATACAATGGAAAGGAAGTGAATACTTAGTGAGTATTTGTATCTATAATATGC
ACTCTCACTAAAGATAATTT

Downstream 100 bases:

>100_bases
AAAATAAAGCATAAGCATAGTTTATGTTATTGCTATATTTTTTATACTTTCATACTACTCGATTTAAGATATATAAACTA
AATTAGTATTTTATATATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKELIISEFLRMRGRKKNRASFILILVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLPIFVMKDLALILFLIVLPMLF
IDSLSGEYESGAYRLILIRPYSKVKLWFSKLIVQSLFSLVIFVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIY
NFKVVALMYFVSIAILALASLISLIVSKCVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL
LICSFLSTLIFIRKDLKC

Sequences:

>Translated_258_residues
MKELIISEFLRMRGRKKNRASFILILVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLPIFVMKDLALILFLIVLPMLF
IDSLSGEYESGAYRLILIRPYSKVKLWFSKLIVQSLFSLVIFVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIY
NFKVVALMYFVSIAILALASLISLIVSKCVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL
LICSFLSTLIFIRKDLKC
>Mature_258_residues
MKELIISEFLRMRGRKKNRASFILILVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLPIFVMKDLALILFLIVLPMLF
IDSLSGEYESGAYRLILIRPYSKVKLWFSKLIVQSLFSLVIFVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIY
NFKVVALMYFVSIAILALASLISLIVSKCVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL
LICSFLSTLIFIRKDLKC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29268; Mature: 29268

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELIISEFLRMRGRKKNRASFILILVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLP
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCH
IFVMKDLALILFLIVLPMLFIDSLSGEYESGAYRLILIRPYSKVKLWFSKLIVQSLFSLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
IFVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIYNFKVVALMYFVSIAILALAS
HHHHHHHHHHHCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLIVSKCVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHCCCCCCHHHHHHHHH
LICSFLSTLIFIRKDLKC
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKELIISEFLRMRGRKKNRASFILILVNFIFSISWYKTFGEGTGVYTPGISTKINSLNLP
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCH
IFVMKDLALILFLIVLPMLFIDSLSGEYESGAYRLILIRPYSKVKLWFSKLIVQSLFSLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
IFVVFFIISVISGYILFPKVTITNFYNIPKVYDKLGAFIYNFKVVALMYFVSIAILALAS
HHHHHHHHHHHCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLIVSKCVAAFLIVISFLIAGIYIGHGLQVIFLPFHNIIKVLSLGKRADFYIPVVSCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHCCCCCCHHHHHHHHH
LICSFLSTLIFIRKDLKC
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA