Click here to switch to the map view.

The map label for this gene is safA [H]

Identifier: 226949016

GI number: 226949016

Start: 1978872

End: 1979507

Strand: Reverse

Name: safA [H]

Synonym: CLM_1930

Alternate gene names: 226949016

Gene position: 1979507-1978872 (Counterclockwise)

Preceding gene: 226949017

Following gene: 226949013

Centisome position: 47.64

GC content: 29.4

Gene sequence:

>636_bases
TTGAAGAAATCTTTATTAAAAAAAATTTTGTTTTCAGTGTTGTTAACTAGTTTTTTATGCCTCTTCAAGGGGATTAGAGT
TTCTGCTGCTGATTATACTTCTTATATTGTAGTTTCCGGAGATAGTTTATGGAAGATTTCTGTAAAATATCAAATTGAAC
TAAAGGAAATAATAGAAGCTAACCCTCAAATTAAAAATACTGATTTAATATATCCTGAAGAAAAAATAAATATACCCAAT
ATAGATACTATAAAAGCTTTAGAAAATGAAATTATAAGTCTCGTAAATATTGAGAGGGAGAATGCCGGATTACCCCATTT
AAGAACTAATTGGCAACTTTCTAAAGTAGCCAGATATAAATCTCAAGATATGGCTACTAAAGGCTATTTCTCTCATATTT
CATCAACTTATGGTTCTCCTTCTACCATGTTACAAAATTTTAATATAAGATCTATTACCACTGGAGAAAATATAGCTTAT
GGCCAAAGGATTCCTCAGCAAGTTATGACCAGTTTAATGGATTCTATCGATGATAGACAAAACATATTAAGTAATGCTTA
TACTGAAATTGGTGTAGGCTTATATAAAAGTTCTTCTGGTGTATATTATTGGACCCAACTTTTTATTAAACCTTAG

Upstream 100 bases:

>100_bases
AATAAAAAATTTATTTCCATTTTTATTATAGGATATAAATATACATTTAAATTTAAACTATTATTGTATATTGTAGAAAA
ATTTAAGGTAGGTGTAATGA

Downstream 100 bases:

>100_bases
GCATTAAATAAAAATCTGTGAGTAAAATATTTTACTCACAGATTTTTATTGTTAAAATGAAATTCATTTTTAGTACTTTG
TTACGTAATCATTTTATGTA

Product: spore coat assembly protein SafA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVSGDSLWKISVKYQIELKEIIEANPQIKNTDLIYPEEKINIPN
IDTIKALENEIISLVNIERENAGLPHLRTNWQLSKVARYKSQDMATKGYFSHISSTYGSPSTMLQNFNIRSITTGENIAY
GQRIPQQVMTSLMDSIDDRQNILSNAYTEIGVGLYKSSSGVYYWTQLFIKP

Sequences:

>Translated_211_residues
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVSGDSLWKISVKYQIELKEIIEANPQIKNTDLIYPEEKINIPN
IDTIKALENEIISLVNIERENAGLPHLRTNWQLSKVARYKSQDMATKGYFSHISSTYGSPSTMLQNFNIRSITTGENIAY
GQRIPQQVMTSLMDSIDDRQNILSNAYTEIGVGLYKSSSGVYYWTQLFIKP
>Mature_211_residues
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVSGDSLWKISVKYQIELKEIIEANPQIKNTDLIYPEEKINIPN
IDTIKALENEIISLVNIERENAGLPHLRTNWQLSKVARYKSQDMATKGYFSHISSTYGSPSTMLQNFNIRSITTGENIAY
GQRIPQQVMTSLMDSIDDRQNILSNAYTEIGVGLYKSSSGVYYWTQLFIKP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 23992; Mature: 23992

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVSGDSLWKISVKYQIELKEIIEA
CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEEEEHHHHHCC
NPQIKNTDLIYPEEKINIPNIDTIKALENEIISLVNIERENAGLPHLRTNWQLSKVARYK
CCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHH
SQDMATKGYFSHISSTYGSPSTMLQNFNIRSITTGENIAYGQRIPQQVMTSLMDSIDDRQ
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHH
NILSNAYTEIGVGLYKSSSGVYYWTQLFIKP
HHHHHHHHHHCCEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MKKSLLKKILFSVLLTSFLCLFKGIRVSAADYTSYIVVSGDSLWKISVKYQIELKEIIEA
CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEEEEEEEHHHHHCC
NPQIKNTDLIYPEEKINIPNIDTIKALENEIISLVNIERENAGLPHLRTNWQLSKVARYK
CCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHH
SQDMATKGYFSHISSTYGSPSTMLQNFNIRSITTGENIAYGQRIPQQVMTSLMDSIDDRQ
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHH
NILSNAYTEIGVGLYKSSSGVYYWTQLFIKP
HHHHHHHHHHCCEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]