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The map label for this gene is 226948997

Identifier: 226948997

GI number: 226948997

Start: 1960768

End: 1961292

Strand: Direct

Name: 226948997

Synonym: CLM_1911

Alternate gene names: NA

Gene position: 1960768-1961292 (Clockwise)

Preceding gene: 226948996

Following gene: 226948998

Centisome position: 47.19

GC content: 30.86

Gene sequence:

>525_bases
ATGAAAGAAGGATTATGGGAAAGATGTACAAATTTTCATGGGCATTCTTGTCCAGGACTAGCCATAGGCTACAAAGCTGT
AGAGGCAGCTATAGAAACTATGAATATAAAATTTTCAGAGGATGAAGAAATAGTTTGTGTAACAGAAAATGATGCCTGTG
GAGTAGATGCAATACAAGTGCTATTAGGTTGCTCTTTAGGAAAAGGTAATATTATTCATAAGGATTCTGGAAAGATGGCT
TTCTCTTTTTTTAATAGAAAAAATGAAGAGTCAATAAGAATGATATTTAGTCCTAAGGAAAAAATGGAAGATAGAAATGA
ATATATGAATTACATATTAAATGCGGATTATAAGGAACTCTTTCAATTCAAAAAACCTAATTATTTTTTACCAGAAAGAG
CTAGATTATTTAAAAATATTACTTGCGAAATCTGTAACGAAAGCACTGCAGAACATAGAGTTAGAATAATGGATGGAAAA
ATGGTTTGTTCTGATTGCTTTAAGGAATATTCAAGAGTTCTTTAG

Upstream 100 bases:

>100_bases
GCATATCTTATTCAAAGCAAAATACAATATATTCATTTATTGTGTTTTTAACGAAGTAAAGTGTTCGATTAGTAAATAAT
AATATTTTGGAGGGATAAAA

Downstream 100 bases:

>100_bases
AATTATTTTGTAAAGTCAATAATAGTATAAATACAGTATTTAATCACAAATTTTTTAAAAAATAATAAATTACATTTATG
TAGTGAAAAAATACAGATCA

Product: formylmethanofuran dehydrogenase E subunit-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKEGLWERCTNFHGHSCPGLAIGYKAVEAAIETMNIKFSEDEEIVCVTENDACGVDAIQVLLGCSLGKGNIIHKDSGKMA
FSFFNRKNEESIRMIFSPKEKMEDRNEYMNYILNADYKELFQFKKPNYFLPERARLFKNITCEICNESTAEHRVRIMDGK
MVCSDCFKEYSRVL

Sequences:

>Translated_174_residues
MKEGLWERCTNFHGHSCPGLAIGYKAVEAAIETMNIKFSEDEEIVCVTENDACGVDAIQVLLGCSLGKGNIIHKDSGKMA
FSFFNRKNEESIRMIFSPKEKMEDRNEYMNYILNADYKELFQFKKPNYFLPERARLFKNITCEICNESTAEHRVRIMDGK
MVCSDCFKEYSRVL
>Mature_174_residues
MKEGLWERCTNFHGHSCPGLAIGYKAVEAAIETMNIKFSEDEEIVCVTENDACGVDAIQVLLGCSLGKGNIIHKDSGKMA
FSFFNRKNEESIRMIFSPKEKMEDRNEYMNYILNADYKELFQFKKPNYFLPERARLFKNITCEICNESTAEHRVRIMDGK
MVCSDCFKEYSRVL

Specific function: Unknown

COG id: COG2191

COG function: function code C; Formylmethanofuran dehydrogenase subunit E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003814
- InterPro:   IPR018316
- InterPro:   IPR001378 [H]

Pfam domain/function: PF02663 FwdE; PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 20098; Mature: 20098

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGLWERCTNFHGHSCPGLAIGYKAVEAAIETMNIKFSEDEEIVCVTENDACGVDAIQV
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCCHHHHHH
LLGCSLGKGNIIHKDSGKMAFSFFNRKNEESIRMIFSPKEKMEDRNEYMNYILNADYKEL
HHHCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHH
FQFKKPNYFLPERARLFKNITCEICNESTAEHRVRIMDGKMVCSDCFKEYSRVL
HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEGLWERCTNFHGHSCPGLAIGYKAVEAAIETMNIKFSEDEEIVCVTENDACGVDAIQV
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCEEECCCCCEEEEECCCCCCHHHHHH
LLGCSLGKGNIIHKDSGKMAFSFFNRKNEESIRMIFSPKEKMEDRNEYMNYILNADYKEL
HHHCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHH
FQFKKPNYFLPERARLFKNITCEICNESTAEHRVRIMDGKMVCSDCFKEYSRVL
HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]