Click here to switch to the map view.

The map label for this gene is 226948776

Identifier: 226948776

GI number: 226948776

Start: 1718524

End: 1719330

Strand: Direct

Name: 226948776

Synonym: CLM_1677

Alternate gene names: NA

Gene position: 1718524-1719330 (Clockwise)

Preceding gene: 226948775

Following gene: 226948777

Centisome position: 41.36

GC content: 29.49

Gene sequence:

>807_bases
ATGAGCAAAGAAACTGAAAATTTGAAGTTGTTTAAATACGATCCAGAAACAGATGATTTTAATACAACAACTTTTAATGT
AACACAAGCTTTAAATAATAACTGGGATAAAATAGATGCACATTTAGAAGATGCATCTTCACAATTGGCTGATATTACGA
CACTAACAGGTAATAAAGATAACTTAAAAACTACCAATAAAACAAATTTAGTAAGTGCAATTAATGAGGTTTTTACTTCT
GGCAATAATGTAAAAATTAATACTGTAGACGCATTATTGCAATTAGATAAAAGTCTACAGATTACAAAAGAAAGCAAATG
GGAAGATATTATAAAAAACATTAGTAAAATTAGCACAGGTAAAAAATGGGCACAGGGTACAGCAAATGTTAACTATTATG
GTCCTGAAGTAGGAATATTTATGGAATCAAATTATCCTTTATCTTCTGCAAGCGTAAATACAAATTGTGGATTTAAGCCA
TCTATCGTGATTTTAACAACAATAGGAATAACCCCACGAACAAACCCAGACGATTATTTTCGCTCTGATGATAGGTACTC
AGAACCAAGAATAGAATTATATATTTATAATGAATTATTACAAGTAAAAATTACATTTAAAACTAAAAGCGGATACAGTA
GCGATATTGCTTATGATCGTGAGTATAGTATTGAGAAAATAAATTCCATTGGTAATACAATTTATACATCTCTTCATATT
ATGCGTTATAGTGTACGTGTAGAAAAAGGGACTAGCACAGCAGAACGATATATGTTCGATAAAGTAAATTGGTATGCATA
TGAATAG

Upstream 100 bases:

>100_bases
TATTTATTTGCATACCTATTATTAAAAGATGTAGAAGAAATAACCTTAACAAAGTTAGAAAACACTACATTAAATAAATT
CGCATTTTAGGAGGGATTGA

Downstream 100 bases:

>100_bases
AGAGGAGATGATTATATGAAAAGAGGGAGCTTAATTATATATGATAACTCAGGTAAAGTATGGGTTAATACTGGTGATGC
AGAGGGATGTATTCCTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSKETENLKLFKYDPETDDFNTTTFNVTQALNNNWDKIDAHLEDASSQLADITTLTGNKDNLKTTNKTNLVSAINEVFTS
GNNVKINTVDALLQLDKSLQITKESKWEDIIKNISKISTGKKWAQGTANVNYYGPEVGIFMESNYPLSSASVNTNCGFKP
SIVILTTIGITPRTNPDDYFRSDDRYSEPRIELYIYNELLQVKITFKTKSGYSSDIAYDREYSIEKINSIGNTIYTSLHI
MRYSVRVEKGTSTAERYMFDKVNWYAYE

Sequences:

>Translated_268_residues
MSKETENLKLFKYDPETDDFNTTTFNVTQALNNNWDKIDAHLEDASSQLADITTLTGNKDNLKTTNKTNLVSAINEVFTS
GNNVKINTVDALLQLDKSLQITKESKWEDIIKNISKISTGKKWAQGTANVNYYGPEVGIFMESNYPLSSASVNTNCGFKP
SIVILTTIGITPRTNPDDYFRSDDRYSEPRIELYIYNELLQVKITFKTKSGYSSDIAYDREYSIEKINSIGNTIYTSLHI
MRYSVRVEKGTSTAERYMFDKVNWYAYE
>Mature_267_residues
SKETENLKLFKYDPETDDFNTTTFNVTQALNNNWDKIDAHLEDASSQLADITTLTGNKDNLKTTNKTNLVSAINEVFTSG
NNVKINTVDALLQLDKSLQITKESKWEDIIKNISKISTGKKWAQGTANVNYYGPEVGIFMESNYPLSSASVNTNCGFKPS
IVILTTIGITPRTNPDDYFRSDDRYSEPRIELYIYNELLQVKITFKTKSGYSSDIAYDREYSIEKINSIGNTIYTSLHIM
RYSVRVEKGTSTAERYMFDKVNWYAYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30567; Mature: 30436

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKETENLKLFKYDPETDDFNTTTFNVTQALNNNWDKIDAHLEDASSQLADITTLTGNKD
CCCCCCCEEEEEECCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCC
NLKTTNKTNLVSAINEVFTSGNNVKINTVDALLQLDKSLQITKESKWEDIIKNISKISTG
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCC
KKWAQGTANVNYYGPEVGIFMESNYPLSSASVNTNCGFKPSIVILTTIGITPRTNPDDYF
CHHHCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH
RSDDRYSEPRIELYIYNELLQVKITFKTKSGYSSDIAYDREYSIEKINSIGNTIYTSLHI
CCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEE
MRYSVRVEKGTSTAERYMFDKVNWYAYE
EEEEEEEECCCCHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
SKETENLKLFKYDPETDDFNTTTFNVTQALNNNWDKIDAHLEDASSQLADITTLTGNKD
CCCCCCEEEEEECCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCC
NLKTTNKTNLVSAINEVFTSGNNVKINTVDALLQLDKSLQITKESKWEDIIKNISKISTG
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCC
KKWAQGTANVNYYGPEVGIFMESNYPLSSASVNTNCGFKPSIVILTTIGITPRTNPDDYF
CHHHCCCCCEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH
RSDDRYSEPRIELYIYNELLQVKITFKTKSGYSSDIAYDREYSIEKINSIGNTIYTSLHI
CCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEE
MRYSVRVEKGTSTAERYMFDKVNWYAYE
EEEEEEEECCCCHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA