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The map label for this gene is 226948589

Identifier: 226948589

GI number: 226948589

Start: 1536465

End: 1537136

Strand: Direct

Name: 226948589

Synonym: CLM_1483

Alternate gene names: NA

Gene position: 1536465-1537136 (Clockwise)

Preceding gene: 226948588

Following gene: 226948590

Centisome position: 36.98

GC content: 30.65

Gene sequence:

>672_bases
ATGGAAATAGGAATTGATTGTGGGCATACAATGTCTGGAGCAGATTATGGAGCAGTAGGAATAAAAGCAGAATCTAATTT
AACTAGAGAGGTAGGAACAAAAGTAATAAGTAAATTACAAGCATTAGGTCATACAGTTATTAAGTGTTACAAGGATACAT
GCAGTAGTTTAAATGATAGTTTAAGTTACAGAACTAATACAGCTAATAATAATGATGTAGATCTATATGTGAGTATACAT
TTTAACTGTTTTAATGGTAGGGCCTATGGTACAGAGGTCTTTACTTATGGAGGGAAAGAATTACAACAAGCTAGAGCAGT
ATTAAACAATATTTGTTCATTAGGCTATACAAATAGAGGGTTAAAAGATGGTTCTAGTCTTTATGTATTGAAACATACAA
AAGCTAAAGTCATGCTTATAGAATGTTGTTTCTGTGATAATAGAAACGATATGAATAGATATAATGCTGAAAATATGGCT
AATGCTATTGTTAAAGGACTAGTACGGAAAACTACAAGCAATATCACACCAAGTCAAGCATCTACAAATAATAATAGTTG
GATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTA
GAATATTAGGTGCTTTAAGTACAATTATATAG

Upstream 100 bases:

>100_bases
GTTTTATTTTGGACAAAGTTCAGCTAGGCAAGCTGTAAAGGAAAGTAAAGAGCAGGAATAGGCCTGTTCTTTTTTTATTA
TAAATTTGGGAGGTAACTTT

Downstream 100 bases:

>100_bases
AAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTT
TTGAAGGTATTTCTATAATG

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MEIGIDCGHTMSGADYGAVGIKAESNLTREVGTKVISKLQALGHTVIKCYKDTCSSLNDSLSYRTNTANNNDVDLYVSIH
FNCFNGRAYGTEVFTYGGKELQQARAVLNNICSLGYTNRGLKDGSSLYVLKHTKAKVMLIECCFCDNRNDMNRYNAENMA
NAIVKGLVRKTTSNITPSQASTNNNSWINLDGKTGTINTLSGVNIREKKSTSSRILGALSTII

Sequences:

>Translated_223_residues
MEIGIDCGHTMSGADYGAVGIKAESNLTREVGTKVISKLQALGHTVIKCYKDTCSSLNDSLSYRTNTANNNDVDLYVSIH
FNCFNGRAYGTEVFTYGGKELQQARAVLNNICSLGYTNRGLKDGSSLYVLKHTKAKVMLIECCFCDNRNDMNRYNAENMA
NAIVKGLVRKTTSNITPSQASTNNNSWINLDGKTGTINTLSGVNIREKKSTSSRILGALSTII
>Mature_223_residues
MEIGIDCGHTMSGADYGAVGIKAESNLTREVGTKVISKLQALGHTVIKCYKDTCSSLNDSLSYRTNTANNNDVDLYVSIH
FNCFNGRAYGTEVFTYGGKELQQARAVLNNICSLGYTNRGLKDGSSLYVLKHTKAKVMLIECCFCDNRNDMNRYNAENMA
NAIVKGLVRKTTSNITPSQASTNNNSWINLDGKTGTINTLSGVNIREKKSTSSRILGALSTII

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.perfringens pIP404 ORF10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3 [H]

EC number: 3.5.1.28

Molecular weight: Translated: 24287; Mature: 24287

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIGIDCGHTMSGADYGAVGIKAESNLTREVGTKVISKLQALGHTVIKCYKDTCSSLNDS
CEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSYRTNTANNNDVDLYVSIHFNCFNGRAYGTEVFTYGGKELQQARAVLNNICSLGYTNRG
CEEEECCCCCCCEEEEEEEEEEEECCCEECCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
LKDGSSLYVLKHTKAKVMLIECCFCDNRNDMNRYNAENMANAIVKGLVRKTTSNITPSQA
CCCCCEEEEEEECCCEEEEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
STNNNSWINLDGKTGTINTLSGVNIREKKSTSSRILGALSTII
CCCCCCEEEECCCCCCEECCCCCCCHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEIGIDCGHTMSGADYGAVGIKAESNLTREVGTKVISKLQALGHTVIKCYKDTCSSLNDS
CEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LSYRTNTANNNDVDLYVSIHFNCFNGRAYGTEVFTYGGKELQQARAVLNNICSLGYTNRG
CEEEECCCCCCCEEEEEEEEEEEECCCEECCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
LKDGSSLYVLKHTKAKVMLIECCFCDNRNDMNRYNAENMANAIVKGLVRKTTSNITPSQA
CCCCCEEEEEEECCCEEEEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
STNNNSWINLDGKTGTINTLSGVNIREKKSTSSRILGALSTII
CCCCCCEEEECCCCCCEECCCCCCCHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8052128; 11792842 [H]