Click here to switch to the map view.

The map label for this gene is 226948575

Identifier: 226948575

GI number: 226948575

Start: 1525876

End: 1526670

Strand: Direct

Name: 226948575

Synonym: CLM_1467

Alternate gene names: NA

Gene position: 1525876-1526670 (Clockwise)

Preceding gene: 226948574

Following gene: 226948576

Centisome position: 36.72

GC content: 21.51

Gene sequence:

>795_bases
ATGGCATACGACATAAAATTAAAAAATAAGAATGAAGAAGAATTAGAAAGAATTGCAAATATTATTATGAATTTATTTTT
GTATCAAGTAGTATTTTTTATAATATTTATTATGTTAGCAAATATTTTAGGATATGTGGGATTAAATAAAAATATTATAC
AACCTTATAGTAAATTAGCAGGGGAAATTTTAGCATATATATTTTTTATTAAGAATTATATTAAAGACAATAGATATAAA
TTAAAATTTAAAAATACATTACATTTTAAAGGATATGTTTTTATAGCAATGCTAATTATAGGGTATATTTTGGTCTATGA
TAATACAATTGATATAGTTTTATCAAAGGTTGTAAAAAATAGTTGGTTCTATGATGTTATGACTAAAGAAATGAAAAATC
CAATAGTAGGATTTATAGGAACAGTGATTATGGCACCTATTTTTGAGGAGATAGTTTATAGAGGAATAATGTTAGATGAG
CTATTGGTTAAATACAATTATAAAAAAGCTATAATTATTTCTGCATTAATATTTGCAGCAATTCATCTTAATTTTGTTCA
ACTAACAGATGCTTTTATTGCAGGTATCATCCTTGGGACTGTTTATTGTAAAACTAAATGTTTAATTCCATGTATTATAA
TTCATTTTTTAAATAACTTATTTTGCAATATAGCTAAATTTTATCCCAGTATATATAAAACTAAATTTAATATTATAAGA
TTAGGTATTGGAATAGCGATTTTAGCAACATTAGCATATATTTTTTTAAAAAATAGAAAAAAAGTTATTTTATAG

Upstream 100 bases:

>100_bases
GTAAAATATATATAAATAAAGATATATATACATAAATGAAAAATGTATATTTAAAATACTAATAATGTAATATAATGTAG
TTAATAAATAGGGGGGTAAA

Downstream 100 bases:

>100_bases
TAAAATCATATCTAATGTTTTAAAGAAGATAATCATAATTTCAAGGTTAATTAATTTGTTTCTCCAAAATTAAAACATAT
ATTGCTAATTATAAATTAGA

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family; Caax Amino Protease Family Protein; Membrane-Associated Protease

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLAGEILAYIFFIKNYIKDNRYK
LKFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKNSWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDE
LLVKYNYKKAIIISALIFAAIHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIR
LGIGIAILATLAYIFLKNRKKVIL

Sequences:

>Translated_264_residues
MAYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLAGEILAYIFFIKNYIKDNRYK
LKFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKNSWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDE
LLVKYNYKKAIIISALIFAAIHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIR
LGIGIAILATLAYIFLKNRKKVIL
>Mature_263_residues
AYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLAGEILAYIFFIKNYIKDNRYKL
KFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKNSWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDEL
LVKYNYKKAIIISALIFAAIHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIRL
GIGIAILATLAYIFLKNRKKVIL

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30617; Mature: 30485

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AYDIKLKNKNEEELERIANIIMNLFLYQVVFFIIFIMLANILGYVGLNKNIIQPYSKLA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GEILAYIFFIKNYIKDNRYKLKFKNTLHFKGYVFIAMLIIGYILVYDNTIDIVLSKVVKN
HHHHHHHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
SWFYDVMTKEMKNPIVGFIGTVIMAPIFEEIVYRGIMLDELLVKYNYKKAIIISALIFAA
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IHLNFVQLTDAFIAGIILGTVYCKTKCLIPCIIIHFLNNLFCNIAKFYPSIYKTKFNIIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIGIAILATLAYIFLKNRKKVIL
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA