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The map label for this gene is ycbO [H]

Identifier: 226948511

GI number: 226948511

Start: 1458118

End: 1458810

Strand: Direct

Name: ycbO [H]

Synonym: CLM_1401

Alternate gene names: 226948511

Gene position: 1458118-1458810 (Clockwise)

Preceding gene: 226948510

Following gene: 226948512

Centisome position: 35.09

GC content: 33.04

Gene sequence:

>693_bases
ATGAAGCATTTAATAAAATTAGAGTTGGAACGATTTCCCCTAAAACCACATTTGTTGGGAGTCATATTAGCAAACATTAT
CATTTTAGCTTTGAGTGTTTCTGTATCCTCCACATTTGCCACTACATCGATGCAATCTATACCAAGTGGATTACCCCCTT
TGCAGTTAAGCACAGTAGCAATAGCTAAGCTACTTATAAAGACTACTTTGATTGTTTGGCAATCTGTATTGATTGCAACA
ATTATTGTTGAGGAATATGAAAGCAAGACAATTATGCTGTTATATACTTATCCAATCAATCGTAAAAAAATGATAGCAGC
AAAGATTACTTTGGTTTGTGGCATTATGTTGATATTCTATTTGAGCTCAGAAGTATTCCAGCATATAGCTATCTATATAT
TTAGCAGATACATAAGTTTTATAACCTATCAATTGGATAATATTTTAATTCAGTTAGTAATCATTGTCTCTGCCATTTTA
TTAGGTCTTGTCCCTTTATATATTGGGATGATAAGAAAATCAACAATTGCTACAATTGTTTCTTCTCTGATAATTGTATG
TATAACATCTAATTCACAGGGAAGCACTGCGGGGTTAATTTCTGTTCCAGCAGTGGCAATAACGTTTGGCGTCATTGGGC
TAATTTTTGCCGCACTTGCCATAAAGAAAATAACTACATCTGATTTATATTGA

Upstream 100 bases:

>100_bases
AAGGCATAATATTAGAAGAAATTTCTATGACAGAAATAGTGGATAAAGGAATAGAGTTGGAATCTTACTATTTAGAATTG
CTAAAAGGAGGAAATGCTTT

Downstream 100 bases:

>100_bases
TAGCAGGAGGATAATTTTTATGGATTTATTTCAAATTCCGTCATTTGTACCAGTTCCAAGTAGAGAAGTAATGTTCAACC
TTTCCATAATTTCAGTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKHLIKLELERFPLKPHLLGVILANIIILALSVSVSSTFATTSMQSIPSGLPPLQLSTVAIAKLLIKTTLIVWQSVLIAT
IIVEEYESKTIMLLYTYPINRKKMIAAKITLVCGIMLIFYLSSEVFQHIAIYIFSRYISFITYQLDNILIQLVIIVSAIL
LGLVPLYIGMIRKSTIATIVSSLIIVCITSNSQGSTAGLISVPAVAITFGVIGLIFAALAIKKITTSDLY

Sequences:

>Translated_230_residues
MKHLIKLELERFPLKPHLLGVILANIIILALSVSVSSTFATTSMQSIPSGLPPLQLSTVAIAKLLIKTTLIVWQSVLIAT
IIVEEYESKTIMLLYTYPINRKKMIAAKITLVCGIMLIFYLSSEVFQHIAIYIFSRYISFITYQLDNILIQLVIIVSAIL
LGLVPLYIGMIRKSTIATIVSSLIIVCITSNSQGSTAGLISVPAVAITFGVIGLIFAALAIKKITTSDLY
>Mature_230_residues
MKHLIKLELERFPLKPHLLGVILANIIILALSVSVSSTFATTSMQSIPSGLPPLQLSTVAIAKLLIKTTLIVWQSVLIAT
IIVEEYESKTIMLLYTYPINRKKMIAAKITLVCGIMLIFYLSSEVFQHIAIYIFSRYISFITYQLDNILIQLVIIVSAIL
LGLVPLYIGMIRKSTIATIVSSLIIVCITSNSQGSTAGLISVPAVAITFGVIGLIFAALAIKKITTSDLY

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25157; Mature: 25157

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLIKLELERFPLKPHLLGVILANIIILALSVSVSSTFATTSMQSIPSGLPPLQLSTVA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
IAKLLIKTTLIVWQSVLIATIIVEEYESKTIMLLYTYPINRKKMIAAKITLVCGIMLIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LSSEVFQHIAIYIFSRYISFITYQLDNILIQLVIIVSAILLGLVPLYIGMIRKSTIATIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLIIVCITSNSQGSTAGLISVPAVAITFGVIGLIFAALAIKKITTSDLY
HHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHLIKLELERFPLKPHLLGVILANIIILALSVSVSSTFATTSMQSIPSGLPPLQLSTVA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
IAKLLIKTTLIVWQSVLIATIIVEEYESKTIMLLYTYPINRKKMIAAKITLVCGIMLIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
LSSEVFQHIAIYIFSRYISFITYQLDNILIQLVIIVSAILLGLVPLYIGMIRKSTIATIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLIIVCITSNSQGSTAGLISVPAVAITFGVIGLIFAALAIKKITTSDLY
HHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377; 10568751 [H]