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The map label for this gene is 226948508

Identifier: 226948508

GI number: 226948508

Start: 1456564

End: 1457151

Strand: Direct

Name: 226948508

Synonym: CLM_1398

Alternate gene names: NA

Gene position: 1456564-1457151 (Clockwise)

Preceding gene: 226948507

Following gene: 226948509

Centisome position: 35.05

GC content: 33.16

Gene sequence:

>588_bases
ATGGCTAAAGGGCCAAAAGGTTTTTCAGATGCAGAAAAAGACGAATTGAGAGCTAAGCTATGCGTAGAATGTGAACGTAG
CTGGGCAGTACATGGATACAAAAAAACAAGTGTGGGAGAATTGACAAGAAAGATTGGAATATCAACAGGAGCGTTCTACT
TATTATATTCTTCTAAGGAAGATTTATTTTGTGAAACTTTGGAACGAGTACAAGATAGACTAAAAAGTGGGTTGCAGGAC
ATCGTTGGTAATGATAGGAGCAAGGCAGGATTTATCAAATCTATAAAATGGCTTTTTCGGGAGTATAATAATTCTCCATT
TTTATATGATTTTAACAATCCTGATTTCTTATCTTTTTTGAACAAGTTGCCAAAAGACAGCGTGGAAAAATTGAAGTTTG
ATAATTTATCGTTTTTTGATAATGCAATTGAACATGCCAATCTTACTTTGAAAATTGACAAAGAAAAAGCATATGCTGTA
ATAGGTACATTGCTGTACACAGTGAGCATGAAGGATGATTTATCATACAATCATCTTGAAATATTTGATTTTTTATTAGA
TAGCGTCATGGATAGACTTTTTGAGTAA

Upstream 100 bases:

>100_bases
TAAATGGATATATTTCGTCTTGACAAAACAGTAGGATATCATTATATTTATATTATGAATTAAAAAATAAATATATTCAT
GATATAAGGAGGGGGTAATA

Downstream 100 bases:

>100_bases
GAGGTGAAATATTAATGGACATATTTGAATACAAGACCATAATCTTTGAAATAGGGCAACCTATATCTATTTTTTCATCT
TCTATAAAAAACGAATTTAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MAKGPKGFSDAEKDELRAKLCVECERSWAVHGYKKTSVGELTRKIGISTGAFYLLYSSKEDLFCETLERVQDRLKSGLQD
IVGNDRSKAGFIKSIKWLFREYNNSPFLYDFNNPDFLSFLNKLPKDSVEKLKFDNLSFFDNAIEHANLTLKIDKEKAYAV
IGTLLYTVSMKDDLSYNHLEIFDFLLDSVMDRLFE

Sequences:

>Translated_195_residues
MAKGPKGFSDAEKDELRAKLCVECERSWAVHGYKKTSVGELTRKIGISTGAFYLLYSSKEDLFCETLERVQDRLKSGLQD
IVGNDRSKAGFIKSIKWLFREYNNSPFLYDFNNPDFLSFLNKLPKDSVEKLKFDNLSFFDNAIEHANLTLKIDKEKAYAV
IGTLLYTVSMKDDLSYNHLEIFDFLLDSVMDRLFE
>Mature_194_residues
AKGPKGFSDAEKDELRAKLCVECERSWAVHGYKKTSVGELTRKIGISTGAFYLLYSSKEDLFCETLERVQDRLKSGLQDI
VGNDRSKAGFIKSIKWLFREYNNSPFLYDFNNPDFLSFLNKLPKDSVEKLKFDNLSFFDNAIEHANLTLKIDKEKAYAVI
GTLLYTVSMKDDLSYNHLEIFDFLLDSVMDRLFE

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22503; Mature: 22372

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKGPKGFSDAEKDELRAKLCVECERSWAVHGYKKTSVGELTRKIGISTGAFYLLYSSKE
CCCCCCCCCCCHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC
DLFCETLERVQDRLKSGLQDIVGNDRSKAGFIKSIKWLFREYNNSPFLYDFNNPDFLSFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
NKLPKDSVEKLKFDNLSFFDNAIEHANLTLKIDKEKAYAVIGTLLYTVSMKDDLSYNHLE
HHCCHHHHHHHCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHH
IFDFLLDSVMDRLFE
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKGPKGFSDAEKDELRAKLCVECERSWAVHGYKKTSVGELTRKIGISTGAFYLLYSSKE
CCCCCCCCCCHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC
DLFCETLERVQDRLKSGLQDIVGNDRSKAGFIKSIKWLFREYNNSPFLYDFNNPDFLSFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
NKLPKDSVEKLKFDNLSFFDNAIEHANLTLKIDKEKAYAVIGTLLYTVSMKDDLSYNHLE
HHCCHHHHHHHCCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHH
IFDFLLDSVMDRLFE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA