Click here to switch to the map view.

The map label for this gene is cotJC [H]

Identifier: 226948497

GI number: 226948497

Start: 1446353

End: 1446925

Strand: Direct

Name: cotJC [H]

Synonym: CLM_1386

Alternate gene names: 226948497

Gene position: 1446353-1446925 (Clockwise)

Preceding gene: 226948496

Following gene: 226948498

Centisome position: 34.81

GC content: 33.86

Gene sequence:

>573_bases
ATGTGGATTTATGAAAAAAAATTGGAATATCCAGTTAATTTAAAAAGTAAAGATTTAGGAATGGCTAAATTTCTTATGGC
ACAGTATGGTGGACCAGATGGGGAATTAAGTGCATCTCTAAGGTACTTATCTCAAAGATATACAATGCCAACATCCAAAA
CTAAAGGACTCTTAACAGACATAGGAACAGAAGAATTGGCACATGTGGAAATAATTGCTACTATGGTATATCAAATAATC
GAGAATGCAAGCCCTAAAGAATTAAGGGAAGCTGGTCTAGGGTCTTATTATACAGAACATGGAAATGCTATATATCCAGC
AGATGCTAATGGAGTACCTTGGACAGCAGCATATATTCAATCTATGGGTGATCCTATAACAGATCTTCATGAGGATATGG
CAGCAGAACAAAAGGCTAGAACTACTTATGAGCATCTTATGAATTTAACAGATGATCACGACATTAAAGATGTTTTAGCA
TTTTTAAGACAAAGAGAAGTAGTGCATTTCCAAAGATTTGGAGAAGCGTTAATGAGTGTGGAAGATAAATTAAATAGTAA
AACTTATTATTAA

Upstream 100 bases:

>100_bases
CAAAAGTAAATTTCCATGGGAATGGGTAGAAGGCGCTTGGCCTTGGGAAAAAGAATATTCAAAAATGTAGCTGAAATATT
TAAATAGGAGTGAATAATAT

Downstream 100 bases:

>100_bases
CAAATTGTAAAAATAAATTTATTAATAATAAAATTGTGTAAATTTATTAAGAATTAAGTTATAATAAAAAATATTAGTCA
TAATTATAAAATAACAATCC

Product: CotJC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MWIYEKKLEYPVNLKSKDLGMAKFLMAQYGGPDGELSASLRYLSQRYTMPTSKTKGLLTDIGTEELAHVEIIATMVYQII
ENASPKELREAGLGSYYTEHGNAIYPADANGVPWTAAYIQSMGDPITDLHEDMAAEQKARTTYEHLMNLTDDHDIKDVLA
FLRQREVVHFQRFGEALMSVEDKLNSKTYY

Sequences:

>Translated_190_residues
MWIYEKKLEYPVNLKSKDLGMAKFLMAQYGGPDGELSASLRYLSQRYTMPTSKTKGLLTDIGTEELAHVEIIATMVYQII
ENASPKELREAGLGSYYTEHGNAIYPADANGVPWTAAYIQSMGDPITDLHEDMAAEQKARTTYEHLMNLTDDHDIKDVLA
FLRQREVVHFQRFGEALMSVEDKLNSKTYY
>Mature_190_residues
MWIYEKKLEYPVNLKSKDLGMAKFLMAQYGGPDGELSASLRYLSQRYTMPTSKTKGLLTDIGTEELAHVEIIATMVYQII
ENASPKELREAGLGSYYTEHGNAIYPADANGVPWTAAYIQSMGDPITDLHEDMAAEQKARTTYEHLMNLTDDHDIKDVLA
FLRQREVVHFQRFGEALMSVEDKLNSKTYY

Specific function: The cotJ operon proteins affect spore coat composition. They are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat [H]

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: NA

Molecular weight: Translated: 21597; Mature: 21597

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWIYEKKLEYPVNLKSKDLGMAKFLMAQYGGPDGELSASLRYLSQRYTMPTSKTKGLLTD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHH
IGTEELAHVEIIATMVYQIIENASPKELREAGLGSYYTEHGNAIYPADANGVPWTAAYIQ
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCEECCCCCCCCCHHHHHHH
SMGDPITDLHEDMAAEQKARTTYEHLMNLTDDHDIKDVLAFLRQREVVHFQRFGEALMSV
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDKLNSKTYY
HHHHCCCCCC
>Mature Secondary Structure
MWIYEKKLEYPVNLKSKDLGMAKFLMAQYGGPDGELSASLRYLSQRYTMPTSKTKGLLTD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHH
IGTEELAHVEIIATMVYQIIENASPKELREAGLGSYYTEHGNAIYPADANGVPWTAAYIQ
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCEECCCCCCCCCHHHHHHH
SMGDPITDLHEDMAAEQKARTTYEHLMNLTDDHDIKDVLAFLRQREVVHFQRFGEALMSV
HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EDKLNSKTYY
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768848; 9384377 [H]