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The map label for this gene is 226948455

Identifier: 226948455

GI number: 226948455

Start: 1398135

End: 1399478

Strand: Direct

Name: 226948455

Synonym: CLM_1340

Alternate gene names: NA

Gene position: 1398135-1399478 (Clockwise)

Preceding gene: 226948454

Following gene: 226948456

Centisome position: 33.65

GC content: 23.44

Gene sequence:

>1344_bases
ATGACTTTTACTAATTTTATAAATATGTTTTTACATTATACAATTATTCCCTCTATACTAATGAGTATTTTGTGCTTCAT
TTCAATATATATTTTATATAAAAACATAATAAGTATAAGTGATATCAAAAAATATTTTATCATTTCATTTGTAGCAGGAA
TGGTTCTCTCTACTGGATCATATACATTAATACTTCCTATACTTTCAGTTATAACCATTGTTCAATTAAAAAATAATGAA
AATGAAGATAAAATAAAAATATTGATAACTATTTATAGTGTGTATTTTGCAAACACAATATATATCTTTATATATACATT
TTCAGGTGCAAGGTTGTACAATATACCACTTAAATATACATTGGTTCAATTTATAATAATGCTGTTTATTATAGTTACAT
TATGTTTAATAATAAAGAGAATTGGCTCAAAGAAAAAGAAAAATGAAGAACTTTCATCAGCCGAAATAAGATTTAGAATG
ATTTTAATAATAAGCACATTATTAACTGTGATGATAGCATCAATTTATATATTTACATGTACATCTATAGTAAATAATCA
AAAGATAGATTTTATTATGGGCAATTTTGTTCCTGAAGCGTTGCCACTAATATCAATTATATTTACAAGTATTATAGTTT
ATTATTATGATAAAAGTGTTGAATATAGAGTTAAATTGAGAAGAGAAATTGAAGAAAAAAATGAAATAGAAGAATATTCA
CATATTATAGAAGATATGTACAGTGAAACAAGAAGATTTAAACATGATTATATGAATATGCTTTCACCTCTTAAGGAATA
TATAGATAATGAAGATATAGAAGGACTTAGTGAGTTTTTTTATAATAACGTTATTGATATGGACAAAAATATAAAATGGA
GCAATAGTAATATAGATAAACTTAAATATATTAAAGTTTCAGGACTAAAGGCAATATTATCAACAAAACTTATAAAAGCT
TCATCAATGAATATAGACATAAATGTTCATATTGTAGAAGATATTGATTATATACATATGAATATAATGGATTTGTGTAG
AATAATAGGCATACTTATGGATAATGCCATTGAAGCATCAGGAGAATGTGAAGCACCTAAGATATGTATTGTTGTTGCAA
ATAAAAATGATTATGTGGTTATAGCATTACATAATAATTTTTTCGGAGACAAGCCTTTAATTCATAAAATATATAAAGAA
GGATTTTCTACAAAGGGCAGAGGAAGAGGATTAGGCCTATATACTGTAAAAAATATTATAGATATAAAATATGAAAATGT
ATTCTTAAATACATCTATTGAAGGAAATGTGTTTATTCAGGAAATATGGATAAAATATATATAA

Upstream 100 bases:

>100_bases
AAAATAAAATTGAAGAAATAGACAAGAAACATAATAAGATAATAATGAAAAATCAGGAAGAGTGTTATGTTTCCTTTAGA
TATATGAAGGGACTAATAGT

Downstream 100 bases:

>100_bases
ACAGAGTTCTCGGTTCCGGAAAGAGTTTTACTACCACTAAAATCTAAGGACATAGCCGCTCTTTACTCTCACTTTTAAGA
AGATGGGAGTATTAGAGCAG

Product: sensor histidine kinase

Products: NA

Alternate protein names: Sensor Histidine Kinase; Signal Transduction Protein; Accessory Gene Regulator Protein C; Histidine Protein Kinase; Histidine Kinase Of Competence Regulon ComD; Accessory Gene Regulator C; Two-Component Sensor Histidine Kinase; Two-Component System Histidine Kinase; Sensory Transduction Protein Kinase; Histidine Protein Kinase PlnB; Lactacin F Two-Component System Histidine Kinase; Accessory Protein Regulator Protein C; Sensor Histidine Kinase ComD; Histidine Kinase Domain Protein; Histidine Protein Kinase ComD; Sensor Histidine Kinase-Like Protein; Two Component Sensor Transduction Histidine Kinase; AbpK Sensory Transduction Histidine Kinase; Sensor Histidine Kinase BlpH; Two-Component Sensor Kinase; Signal Transduction Protein With A C-Terminal ATPase Domain; Histidine Kinase-Like ATPase; Bacteriocin Production-Related Histidine Kinase

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MTFTNFINMFLHYTIIPSILMSILCFISIYILYKNIISISDIKKYFIISFVAGMVLSTGSYTLILPILSVITIVQLKNNE
NEDKIKILITIYSVYFANTIYIFIYTFSGARLYNIPLKYTLVQFIIMLFIIVTLCLIIKRIGSKKKKNEELSSAEIRFRM
ILIISTLLTVMIASIYIFTCTSIVNNQKIDFIMGNFVPEALPLISIIFTSIIVYYYDKSVEYRVKLRREIEEKNEIEEYS
HIIEDMYSETRRFKHDYMNMLSPLKEYIDNEDIEGLSEFFYNNVIDMDKNIKWSNSNIDKLKYIKVSGLKAILSTKLIKA
SSMNIDINVHIVEDIDYIHMNIMDLCRIIGILMDNAIEASGECEAPKICIVVANKNDYVVIALHNNFFGDKPLIHKIYKE
GFSTKGRGRGLGLYTVKNIIDIKYENVFLNTSIEGNVFIQEIWIKYI

Sequences:

>Translated_447_residues
MTFTNFINMFLHYTIIPSILMSILCFISIYILYKNIISISDIKKYFIISFVAGMVLSTGSYTLILPILSVITIVQLKNNE
NEDKIKILITIYSVYFANTIYIFIYTFSGARLYNIPLKYTLVQFIIMLFIIVTLCLIIKRIGSKKKKNEELSSAEIRFRM
ILIISTLLTVMIASIYIFTCTSIVNNQKIDFIMGNFVPEALPLISIIFTSIIVYYYDKSVEYRVKLRREIEEKNEIEEYS
HIIEDMYSETRRFKHDYMNMLSPLKEYIDNEDIEGLSEFFYNNVIDMDKNIKWSNSNIDKLKYIKVSGLKAILSTKLIKA
SSMNIDINVHIVEDIDYIHMNIMDLCRIIGILMDNAIEASGECEAPKICIVVANKNDYVVIALHNNFFGDKPLIHKIYKE
GFSTKGRGRGLGLYTVKNIIDIKYENVFLNTSIEGNVFIQEIWIKYI
>Mature_446_residues
TFTNFINMFLHYTIIPSILMSILCFISIYILYKNIISISDIKKYFIISFVAGMVLSTGSYTLILPILSVITIVQLKNNEN
EDKIKILITIYSVYFANTIYIFIYTFSGARLYNIPLKYTLVQFIIMLFIIVTLCLIIKRIGSKKKKNEELSSAEIRFRMI
LIISTLLTVMIASIYIFTCTSIVNNQKIDFIMGNFVPEALPLISIIFTSIIVYYYDKSVEYRVKLRREIEEKNEIEEYSH
IIEDMYSETRRFKHDYMNMLSPLKEYIDNEDIEGLSEFFYNNVIDMDKNIKWSNSNIDKLKYIKVSGLKAILSTKLIKAS
SMNIDINVHIVEDIDYIHMNIMDLCRIIGILMDNAIEASGECEAPKICIVVANKNDYVVIALHNNFFGDKPLIHKIYKEG
FSTKGRGRGLGLYTVKNIIDIKYENVFLNTSIEGNVFIQEIWIKYI

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51936; Mature: 51805

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTNFINMFLHYTIIPSILMSILCFISIYILYKNIISISDIKKYFIISFVAGMVLSTGS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YTLILPILSVITIVQLKNNENEDKIKILITIYSVYFANTIYIFIYTFSGARLYNIPLKYT
HHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCEEEEEEEEECCCEEEECCHHHH
LVQFIIMLFIIVTLCLIIKRIGSKKKKNEELSSAEIRFRMILIISTLLTVMIASIYIFTC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSIVNNQKIDFIMGNFVPEALPLISIIFTSIIVYYYDKSVEYRVKLRREIEEKNEIEEYS
HHHHCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
HIIEDMYSETRRFKHDYMNMLSPLKEYIDNEDIEGLSEFFYNNVIDMDKNIKWSNSNIDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCC
LKYIKVSGLKAILSTKLIKASSMNIDINVHIVEDIDYIHMNIMDLCRIIGILMDNAIEAS
EEEEEHHHHHHHHHHHHHEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
GECEAPKICIVVANKNDYVVIALHNNFFGDKPLIHKIYKEGFSTKGRGRGLGLYTVKNII
CCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHH
DIKYENVFLNTSIEGNVFIQEIWIKYI
EEEEEEEEEECCCCCCEEHHHHHHHCC
>Mature Secondary Structure 
TFTNFINMFLHYTIIPSILMSILCFISIYILYKNIISISDIKKYFIISFVAGMVLSTGS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YTLILPILSVITIVQLKNNENEDKIKILITIYSVYFANTIYIFIYTFSGARLYNIPLKYT
HHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHCEEEEEEEEECCCEEEECCHHHH
LVQFIIMLFIIVTLCLIIKRIGSKKKKNEELSSAEIRFRMILIISTLLTVMIASIYIFTC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSIVNNQKIDFIMGNFVPEALPLISIIFTSIIVYYYDKSVEYRVKLRREIEEKNEIEEYS
HHHHCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
HIIEDMYSETRRFKHDYMNMLSPLKEYIDNEDIEGLSEFFYNNVIDMDKNIKWSNSNIDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCC
LKYIKVSGLKAILSTKLIKASSMNIDINVHIVEDIDYIHMNIMDLCRIIGILMDNAIEAS
EEEEEHHHHHHHHHHHHHEECCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC
GECEAPKICIVVANKNDYVVIALHNNFFGDKPLIHKIYKEGFSTKGRGRGLGLYTVKNII
CCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHH
DIKYENVFLNTSIEGNVFIQEIWIKYI
EEEEEEEEEECCCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA