| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is gufA [H]
Identifier: 226948444
GI number: 226948444
Start: 1388537
End: 1389346
Strand: Direct
Name: gufA [H]
Synonym: CLM_1328
Alternate gene names: 226948444
Gene position: 1388537-1389346 (Clockwise)
Preceding gene: 226948443
Following gene: 226948445
Centisome position: 33.42
GC content: 37.16
Gene sequence:
>810_bases ATGACTTGGTTTAAAGAATTGAATCCCATTATGCAGGCTCTTTTAGCTACATTATTTACCTGGGCAGTTACAGCTTTAGG AGCAGCATTAGTGTTTTTTTTTAAAAATATAAATAAAAAAGTATTAAATGCTATGTTAGGTTTTGCAGCAGGAGTAATGA TTGCGGCTAGCTATTGGTCACTTTTAGCACCGGCTATAGAAATGGCAGAATCCCAGGGCAAAATTGCATGGATACCGGCA GCAGTAGGTTTTTTAGCAGGAGGAATATTTTTAAGAATAGTAGATAGAATTCTTCCACACCTTCATTTAGGTAAAGATAG AGATGAGGCGGAGGGAATTAAAACTAGTTGGCAAAAGAGCATATTATTAGTTTTAGCTATAACCCTTCATAACATACCAG AAGGATTAGCTGTAGGAGTGGCCTTTGGAGCAGTAGGGGCCAATATAGAGTCTGCATCTTTAGCAGGAGCTATAGCTTTA GCATTAGGTATAGGAATTCAAAACTTTCCTGAAGGAGCAGCAGTATCTATACCACTAAGAAGAGAAGGAAATAGTAGATT AAAAAGTTTTTGGTATGGGCAAGCTTCTGGTATAGTTGAACCTATAGCAGGTGTTATAGGGGCAGCGGCAGTATTATTTA TAAGAAATTTATTACCCTATGCCTTATCCTTTGCAGCTGGAGCCATGATATTTGTTGTAGTAGAGGAACTAATTCCTGAA GCCCAGGAAGGAAAGGATACAGATATATCATCTATAGGAGTATTAATTGGATTTACTGTAATGATGATATTAGATGTAGC TTTAGGCTAA
Upstream 100 bases:
>100_bases TAAATATTGATTATATTGATAGTACGTGATAAAATCAAAATAAGAAATTATCAAGTAATAATTATTATCGTTTATTCAGA ACTAGAAAGAAGGGGAGAGT
Downstream 100 bases:
>100_bases ACAGAGTTCTTGGCTTCAGAGGGAGTTTTTACTCACTCTGAAGCTTATTAACAAAATTCTTAGGAGTTTTACTCCTTAGA AGTCGTTATCCTTTAGGGGA
Product: ZIP family zinc transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTWFKELNPIMQALLATLFTWAVTALGAALVFFFKNINKKVLNAMLGFAAGVMIAASYWSLLAPAIEMAESQGKIAWIPA AVGFLAGGIFLRIVDRILPHLHLGKDRDEAEGIKTSWQKSILLVLAITLHNIPEGLAVGVAFGAVGANIESASLAGAIAL ALGIGIQNFPEGAAVSIPLRREGNSRLKSFWYGQASGIVEPIAGVIGAAAVLFIRNLLPYALSFAAGAMIFVVVEELIPE AQEGKDTDISSIGVLIGFTVMMILDVALG
Sequences:
>Translated_269_residues MTWFKELNPIMQALLATLFTWAVTALGAALVFFFKNINKKVLNAMLGFAAGVMIAASYWSLLAPAIEMAESQGKIAWIPA AVGFLAGGIFLRIVDRILPHLHLGKDRDEAEGIKTSWQKSILLVLAITLHNIPEGLAVGVAFGAVGANIESASLAGAIAL ALGIGIQNFPEGAAVSIPLRREGNSRLKSFWYGQASGIVEPIAGVIGAAAVLFIRNLLPYALSFAAGAMIFVVVEELIPE AQEGKDTDISSIGVLIGFTVMMILDVALG >Mature_268_residues TWFKELNPIMQALLATLFTWAVTALGAALVFFFKNINKKVLNAMLGFAAGVMIAASYWSLLAPAIEMAESQGKIAWIPAA VGFLAGGIFLRIVDRILPHLHLGKDRDEAEGIKTSWQKSILLVLAITLHNIPEGLAVGVAFGAVGANIESASLAGAIALA LGIGIQNFPEGAAVSIPLRREGNSRLKSFWYGQASGIVEPIAGVIGAAAVLFIRNLLPYALSFAAGAMIFVVVEELIPEA QEGKDTDISSIGVLIGFTVMMILDVALG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=329, Percent_Identity=42.5531914893617, Blast_Score=220, Evalue=1e-57, Organism=Homo sapiens, GI229577422, Length=335, Percent_Identity=39.4029850746269, Blast_Score=190, Evalue=1e-48, Organism=Escherichia coli, GI1789419, Length=259, Percent_Identity=30.1158301158301, Blast_Score=84, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17507805, Length=320, Percent_Identity=47.8125, Blast_Score=276, Evalue=6e-75, Organism=Drosophila melanogaster, GI24652846, Length=164, Percent_Identity=54.2682926829268, Blast_Score=175, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 28373; Mature: 28242
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWFKELNPIMQALLATLFTWAVTALGAALVFFFKNINKKVLNAMLGFAAGVMIAASYWS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPAIEMAESQGKIAWIPAAVGFLAGGIFLRIVDRILPHLHLGKDRDEAEGIKTSWQKS HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ILLVLAITLHNIPEGLAVGVAFGAVGANIESASLAGAIALALGIGIQNFPEGAAVSIPLR HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC REGNSRLKSFWYGQASGIVEPIAGVIGAAAVLFIRNLLPYALSFAAGAMIFVVVEELIPE CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AQEGKDTDISSIGVLIGFTVMMILDVALG CCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TWFKELNPIMQALLATLFTWAVTALGAALVFFFKNINKKVLNAMLGFAAGVMIAASYWS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAPAIEMAESQGKIAWIPAAVGFLAGGIFLRIVDRILPHLHLGKDRDEAEGIKTSWQKS HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ILLVLAITLHNIPEGLAVGVAFGAVGANIESASLAGAIALALGIGIQNFPEGAAVSIPLR HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC REGNSRLKSFWYGQASGIVEPIAGVIGAAAVLFIRNLLPYALSFAAGAMIFVVVEELIPE CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AQEGKDTDISSIGVLIGFTVMMILDVALG CCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]