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The map label for this gene is 226948398

Identifier: 226948398

GI number: 226948398

Start: 1337004

End: 1338077

Strand: Direct

Name: 226948398

Synonym: CLM_1282

Alternate gene names: NA

Gene position: 1337004-1338077 (Clockwise)

Preceding gene: 226948397

Following gene: 226948399

Centisome position: 32.18

GC content: 30.35

Gene sequence:

>1074_bases
ATGCATAAAAGATTATTTATTCCAGGACCGGTAGAAGTAGAAAGAGATGTATTAGAAAAAATGAGTGCAGCTATGATAGG
TCATAGAAGCAAAGAAGCATCAGTTCTTCAGAAAGATATTAGTGATAAATTAAGAAAAGTTTTTAATACAAAAGAGGAGA
TTTTACTATCTACATCTTCTGGTAGTGGACTTATGGAAGGTGCTATAAGATGTACTACAGTTAAAAGAGCAGCAGTATTT
GCTATAGGTGCTTTTGGTAAGAGATGGTATGACATGGCTGTAGCAAATAATGTTCCAGCAGATTTATATGAAGTACCATG
GGGTGAAGCTATAAAACCAGAATTAGTAGAGGAAGTATTAGCCACAGGAAAATATGATTCTATTTTTATAACTCATAATG
AAACTTCTACAGGCATTATGAATCCAGTAAAAGAAATAAGTAAAGTAATAAAGAAATATCCGGAGGTAATCTGGTCATTA
GATTGTGTTAGTTCTATGGCAGGAACAAAAATAGATGTAGATAAACTAGGGGTAGATGTATGTATAACCTCTACTCAAAA
GGCATTAGCATTACCACCAGGAATGGCTATCTGCTCATTCTCTCAAAGGGCTGTAGAAAGAGCAGAAAAAGTTACTAACA
GAGGATATTATTTAGATTTACTTTCTCTTTATAAATATATACAAAAGAAAAATTATCAATATCCATCAACACCTTCTTTA
TCTCATATGTTTGCTATGGACTATAGATTAGATAAAATTTTAGAGGAAGGTCTTGAAGAAAGATATGAAAGACATATAGA
AATGGCAGAGTATGTAAGAGATTGGGCTAGAAAATACTTTAAAATTTATGGAGATGAGAAATATTTATCAAATACCTTAA
CTAATATAGAAAATACAAGAAATATAGATATTAAAAAATTAAATGAAGAATTAGGTAAAAGAGGCTTCCAAATATCTAAT
GGCTATGGAAAACTAAAAGACAAAGGATTTAGAATAGCTCATATGGGACAATGCACTTTGAAAGATATAAAGGAATTATT
AGAAAATATAAACAATATTTTGGATTTAAAATAG

Upstream 100 bases:

>100_bases
AATACTTTGTTGGTAAAATATATGAATAGCATAAATTCATAGTTCAGAATATTGAAAAAATATTTAAAATTATAGTGAAA
TTAAGAGGAGGATATTTATT

Downstream 100 bases:

>100_bases
GTTTAATTTATAACTTGAAAAATAGTGAAATTATAACTTTGGATAAAAGCAATTATAATAGGATTTTCGGTTTATGAATT
TAAGAGCAATTATAATAAAT

Product: class V aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MHKRLFIPGPVEVERDVLEKMSAAMIGHRSKEASVLQKDISDKLRKVFNTKEEILLSTSSGSGLMEGAIRCTTVKRAAVF
AIGAFGKRWYDMAVANNVPADLYEVPWGEAIKPELVEEVLATGKYDSIFITHNETSTGIMNPVKEISKVIKKYPEVIWSL
DCVSSMAGTKIDVDKLGVDVCITSTQKALALPPGMAICSFSQRAVERAEKVTNRGYYLDLLSLYKYIQKKNYQYPSTPSL
SHMFAMDYRLDKILEEGLEERYERHIEMAEYVRDWARKYFKIYGDEKYLSNTLTNIENTRNIDIKKLNEELGKRGFQISN
GYGKLKDKGFRIAHMGQCTLKDIKELLENINNILDLK

Sequences:

>Translated_357_residues
MHKRLFIPGPVEVERDVLEKMSAAMIGHRSKEASVLQKDISDKLRKVFNTKEEILLSTSSGSGLMEGAIRCTTVKRAAVF
AIGAFGKRWYDMAVANNVPADLYEVPWGEAIKPELVEEVLATGKYDSIFITHNETSTGIMNPVKEISKVIKKYPEVIWSL
DCVSSMAGTKIDVDKLGVDVCITSTQKALALPPGMAICSFSQRAVERAEKVTNRGYYLDLLSLYKYIQKKNYQYPSTPSL
SHMFAMDYRLDKILEEGLEERYERHIEMAEYVRDWARKYFKIYGDEKYLSNTLTNIENTRNIDIKKLNEELGKRGFQISN
GYGKLKDKGFRIAHMGQCTLKDIKELLENINNILDLK
>Mature_357_residues
MHKRLFIPGPVEVERDVLEKMSAAMIGHRSKEASVLQKDISDKLRKVFNTKEEILLSTSSGSGLMEGAIRCTTVKRAAVF
AIGAFGKRWYDMAVANNVPADLYEVPWGEAIKPELVEEVLATGKYDSIFITHNETSTGIMNPVKEISKVIKKYPEVIWSL
DCVSSMAGTKIDVDKLGVDVCITSTQKALALPPGMAICSFSQRAVERAEKVTNRGYYLDLLSLYKYIQKKNYQYPSTPSL
SHMFAMDYRLDKILEEGLEERYERHIEMAEYVRDWARKYFKIYGDEKYLSNTLTNIENTRNIDIKKLNEELGKRGFQISN
GYGKLKDKGFRIAHMGQCTLKDIKELLENINNILDLK

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=282, Percent_Identity=29.0780141843972, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17536281, Length=363, Percent_Identity=26.9972451790634, Blast_Score=135, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6321079, Length=376, Percent_Identity=26.5957446808511, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17530823, Length=370, Percent_Identity=26.7567567567568, Blast_Score=115, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 40652; Mature: 40652

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKRLFIPGPVEVERDVLEKMSAAMIGHRSKEASVLQKDISDKLRKVFNTKEEILLSTSS
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCC
GSGLMEGAIRCTTVKRAAVFAIGAFGKRWYDMAVANNVPADLYEVPWGEAIKPELVEEVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHH
ATGKYDSIFITHNETSTGIMNPVKEISKVIKKYPEVIWSLDCVSSMAGTKIDVDKLGVDV
HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCEE
CITSTQKALALPPGMAICSFSQRAVERAEKVTNRGYYLDLLSLYKYIQKKNYQYPSTPSL
EEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCH
SHMFAMDYRLDKILEEGLEERYERHIEMAEYVRDWARKYFKIYGDEKYLSNTLTNIENTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
NIDIKKLNEELGKRGFQISNGYGKLKDKGFRIAHMGQCTLKDIKELLENINNILDLK
CCHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHKRLFIPGPVEVERDVLEKMSAAMIGHRSKEASVLQKDISDKLRKVFNTKEEILLSTSS
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCC
GSGLMEGAIRCTTVKRAAVFAIGAFGKRWYDMAVANNVPADLYEVPWGEAIKPELVEEVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHH
ATGKYDSIFITHNETSTGIMNPVKEISKVIKKYPEVIWSLDCVSSMAGTKIDVDKLGVDV
HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCEE
CITSTQKALALPPGMAICSFSQRAVERAEKVTNRGYYLDLLSLYKYIQKKNYQYPSTPSL
EEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCH
SHMFAMDYRLDKILEEGLEERYERHIEMAEYVRDWARKYFKIYGDEKYLSNTLTNIENTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
NIDIKKLNEELGKRGFQISNGYGKLKDKGFRIAHMGQCTLKDIKELLENINNILDLK
CCHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]