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The map label for this gene is 226948385

Identifier: 226948385

GI number: 226948385

Start: 1324816

End: 1325775

Strand: Direct

Name: 226948385

Synonym: CLM_1269

Alternate gene names: NA

Gene position: 1324816-1325775 (Clockwise)

Preceding gene: 226948384

Following gene: 226948386

Centisome position: 31.88

GC content: 25.21

Gene sequence:

>960_bases
GTGTTAAATTTTAAAAGATTAACTATTAATGATAAAAAATTATTTGAAAGCTATATAAAACCATATAATTTTTTAAATTG
TGAGTATTCTTTTACAACTTTATATATTTGGAGAAAGGCTTTAGATATAAAATACGCCATATGTAAAGGAGCTCTTATTA
TTAAAAAGAAGGATTTTAATGATGAATATCATTTTATGCAACCTTTAGGATATAAAAAAGAAAATTTAAAGGATATAATA
GAAGTTTTAATGGATTATAAAAAAGAAAAATGCATTAAATATCTCTTTAAAGATTTAAGATATGATTTTGTTAAAGAATT
AAAAAATCTATACAAAGATGAAGAAATTTATAGCAATATAATGGTAGAAGAGGATAGGGATAACTTTGATTATTTATATG
AGAGTAAAAAACTTATAACTTTATCAGGTAAAAAGCTTCATGGCAAAAAGAATCACTATAACTATTTTATAAAAAATTAT
AACTATGGTATAAGGGATTTTGCAGAAGAAGGAGTTATAGAAGATAGTTTAAAAATTGCTGAGTTATGGTATGAAAAAAA
TGATACAAAGGATAAACATTTACTTTATGAGCTTCAAAGCATAAGAGATATGTGCTGTAACATGGATGTTTTAGGATTAA
AAGGCATGGGATTATATATAGACGGAGAAATTGCAGGGTTTAGTATAGGAGAAAAATTTAGTGATAATATGGCTATTATA
CACATAGAAAAAGCTAATAAGGATCTTAGAGGAGCTTATACCTTTGTAAATAAAGCTTTCGTTGAAAATTATTTTAGTGA
TGTACCTATAATAAATAGGGAACAAGATTTAGGAATAGAAGGACTAAGAAAAGCGAAATTGTCCTATTCACCCCTAGATT
TTGAAAAAAAATATATGGTGGATATATGTTATAACTGTGGATGTAGTGATAGGGAAGAAAGACAAAGACAGATTATATAA

Upstream 100 bases:

>100_bases
CTCTTCTTAATCAATAATCAATATTCGAAGGGTTATTTTTTTGATATTAAAGTAGAGTAAGTTACTAAGAAATAAATATA
TTATTAAAAGAGGGGATAAT

Downstream 100 bases:

>100_bases
AAAATACTACAGTTATTTCGATTATAGGTAGTGTATATAAAAGATTTAAAAGAAAACTATGCATCAGGTAATTTATAAAA
TATTAAGGAAAGGAATGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAICKGALIIKKKDFNDEYHFMQPLGYKKENLKDII
EVLMDYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNIMVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNY
NYGIRDFAEEGVIEDSLKIAELWYEKNDTKDKHLLYELQSIRDMCCNMDVLGLKGMGLYIDGEIAGFSIGEKFSDNMAII
HIEKANKDLRGAYTFVNKAFVENYFSDVPIINREQDLGIEGLRKAKLSYSPLDFEKKYMVDICYNCGCSDREERQRQII

Sequences:

>Translated_319_residues
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAICKGALIIKKKDFNDEYHFMQPLGYKKENLKDII
EVLMDYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNIMVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNY
NYGIRDFAEEGVIEDSLKIAELWYEKNDTKDKHLLYELQSIRDMCCNMDVLGLKGMGLYIDGEIAGFSIGEKFSDNMAII
HIEKANKDLRGAYTFVNKAFVENYFSDVPIINREQDLGIEGLRKAKLSYSPLDFEKKYMVDICYNCGCSDREERQRQII
>Mature_319_residues
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAICKGALIIKKKDFNDEYHFMQPLGYKKENLKDII
EVLMDYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNIMVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNY
NYGIRDFAEEGVIEDSLKIAELWYEKNDTKDKHLLYELQSIRDMCCNMDVLGLKGMGLYIDGEIAGFSIGEKFSDNMAII
HIEKANKDLRGAYTFVNKAFVENYFSDVPIINREQDLGIEGLRKAKLSYSPLDFEKKYMVDICYNCGCSDREERQRQII

Specific function: Unknown

COG id: COG4866

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38088; Mature: 38088

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAICKGALIIKKKDFN
CCCCEEEEECHHHHHHHHCCCCCEEECEEEHHHHEEHHHHHHHEEEECCCEEEEEECCCC
DEYHFMQPLGYKKENLKDIIEVLMDYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNI
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNYNYGIRDFAEEGVIEDSLKIA
EEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHH
ELWYEKNDTKDKHLLYELQSIRDMCCNMDVLGLKGMGLYIDGEIAGFSIGEKFSDNMAII
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCEECCCCCCCCCCCEEEE
HIEKANKDLRGAYTFVNKAFVENYFSDVPIINREQDLGIEGLRKAKLSYSPLDFEKKYMV
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
DICYNCGCSDREERQRQII
HHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MLNFKRLTINDKKLFESYIKPYNFLNCEYSFTTLYIWRKALDIKYAICKGALIIKKKDFN
CCCCEEEEECHHHHHHHHCCCCCEEECEEEHHHHEEHHHHHHHEEEECCCEEEEEECCCC
DEYHFMQPLGYKKENLKDIIEVLMDYKKEKCIKYLFKDLRYDFVKELKNLYKDEEIYSNI
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MVEEDRDNFDYLYESKKLITLSGKKLHGKKNHYNYFIKNYNYGIRDFAEEGVIEDSLKIA
EEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHH
ELWYEKNDTKDKHLLYELQSIRDMCCNMDVLGLKGMGLYIDGEIAGFSIGEKFSDNMAII
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCEECCCCCCCCCCCEEEE
HIEKANKDLRGAYTFVNKAFVENYFSDVPIINREQDLGIEGLRKAKLSYSPLDFEKKYMV
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
DICYNCGCSDREERQRQII
HHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12949158; 1386735 [H]