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The map label for this gene is wtpB [H]

Identifier: 226948383

GI number: 226948383

Start: 1322676

End: 1323482

Strand: Direct

Name: wtpB [H]

Synonym: CLM_1267

Alternate gene names: 226948383

Gene position: 1322676-1323482 (Clockwise)

Preceding gene: 226948382

Following gene: 226948384

Centisome position: 31.83

GC content: 25.9

Gene sequence:

>807_bases
ATGAAAAATAAAAAAATAATTTCCAATATAATAATATATAGCTTCGCAATTTTCTTCCTATTTCCTATAATAATATTATG
TCTATGGAGTTTTTCAAAAAATTGGAGTTGGCCACTAGTTATACCAAAGGAATTTGGATTAAGAGGATTAAAATATGCAT
TAGATACTAAATCTAAGAATTTAAGTATCTTATTTAAAAGTATAGGAATATCAACAATAGTAACTTTTATAACTATAATT
ATAAGTATTCCAGCAGCTAAGGCTTTGGGAATATATAATTTTAAGGGTAAAAATTTTATAAAGATATTAATATTTTCTCC
TATAATAGTACCTGGCATTTCTGTGGCATTAGGAACTCATGTATCCTTTTTAAAACTAGGGTTAGCTAACACTATATTAG
GGGTAATAATAATACATTTGATACCGTGTATTCCTTATGCAGTTTTTATGCTTACGGATGTTTTTGAGATAATTGGAGAT
AAAATGGAGAAGCAAGCTAAGGTTTTAGGAGCCAATAGGTATCAATGCTTTTTTTATGTAACATTACCGTTAATTTCTTC
AGGTATAATGTCTGCTGCATTTATGACTTTTATAATATCCTTTAGTCAATATTTTTTAACTTTTTTGATAGGGGGAGGAC
AGGTTATTACATATCCTATAGTAATGTTTCCATTCATACAAAGTGGAGATAGAACCATAGCTTCTAGTTTTAGTCTTATT
TTTATTATTACATCTTTAATTTATTTATTAATTATAAATAAATGTATTAAGTCTTATTACAAAACAGATAAATTTTTAAA
TGTATAG

Upstream 100 bases:

>100_bases
TATAGTTATATCAACCTTCTTAATAATTTTGTATAGAAAATCTTTGGATATTTTTAGAAAAAGAAATTTAGATAATAAAT
AGGAAAGGAAAATATTATAG

Downstream 100 bases:

>100_bases
AGGTATATATAATGAAGGAAATAGAAGTAAAAGGAATAAAGAAAATATTTAATAATAAAAATGTATTGGATAATATAAGC
TTTTCAGTGGAAAAGGGAGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKNKKIISNIIIYSFAIFFLFPIIILCLWSFSKNWSWPLVIPKEFGLRGLKYALDTKSKNLSILFKSIGISTIVTFITII
ISIPAAKALGIYNFKGKNFIKILIFSPIIVPGISVALGTHVSFLKLGLANTILGVIIIHLIPCIPYAVFMLTDVFEIIGD
KMEKQAKVLGANRYQCFFYVTLPLISSGIMSAAFMTFIISFSQYFLTFLIGGGQVITYPIVMFPFIQSGDRTIASSFSLI
FIITSLIYLLIINKCIKSYYKTDKFLNV

Sequences:

>Translated_268_residues
MKNKKIISNIIIYSFAIFFLFPIIILCLWSFSKNWSWPLVIPKEFGLRGLKYALDTKSKNLSILFKSIGISTIVTFITII
ISIPAAKALGIYNFKGKNFIKILIFSPIIVPGISVALGTHVSFLKLGLANTILGVIIIHLIPCIPYAVFMLTDVFEIIGD
KMEKQAKVLGANRYQCFFYVTLPLISSGIMSAAFMTFIISFSQYFLTFLIGGGQVITYPIVMFPFIQSGDRTIASSFSLI
FIITSLIYLLIINKCIKSYYKTDKFLNV
>Mature_268_residues
MKNKKIISNIIIYSFAIFFLFPIIILCLWSFSKNWSWPLVIPKEFGLRGLKYALDTKSKNLSILFKSIGISTIVTFITII
ISIPAAKALGIYNFKGKNFIKILIFSPIIVPGISVALGTHVSFLKLGLANTILGVIIIHLIPCIPYAVFMLTDVFEIIGD
KMEKQAKVLGANRYQCFFYVTLPLISSGIMSAAFMTFIISFSQYFLTFLIGGGQVITYPIVMFPFIQSGDRTIASSFSLI
FIITSLIYLLIINKCIKSYYKTDKFLNV

Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=248, Percent_Identity=25.4032258064516, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30103; Mature: 30103

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKIISNIIIYSFAIFFLFPIIILCLWSFSKNWSWPLVIPKEFGLRGLKYALDTKSKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCHHHHHHCCCCCC
LSILFKSIGISTIVTFITIIISIPAAKALGIYNFKGKNFIKILIFSPIIVPGISVALGTH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCEEEEEEECCHHHCCHHHHHHHH
VSFLKLGLANTILGVIIIHLIPCIPYAVFMLTDVFEIIGDKMEKQAKVLGANRYQCFFYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
TLPLISSGIMSAAFMTFIISFSQYFLTFLIGGGQVITYPIVMFPFIQSGDRTIASSFSLI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
FIITSLIYLLIINKCIKSYYKTDKFLNV
HHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MKNKKIISNIIIYSFAIFFLFPIIILCLWSFSKNWSWPLVIPKEFGLRGLKYALDTKSKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCHHHHHHCCCCCC
LSILFKSIGISTIVTFITIIISIPAAKALGIYNFKGKNFIKILIFSPIIVPGISVALGTH
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCEEEEEEECCHHHCCHHHHHHHH
VSFLKLGLANTILGVIIIHLIPCIPYAVFMLTDVFEIIGDKMEKQAKVLGANRYQCFFYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
TLPLISSGIMSAAFMTFIISFSQYFLTFLIGGGQVITYPIVMFPFIQSGDRTIASSFSLI
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
FIITSLIYLLIINKCIKSYYKTDKFLNV
HHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]