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The map label for this gene is yxxF [H]

Identifier: 226947976

GI number: 226947976

Start: 896998

End: 897879

Strand: Reverse

Name: yxxF [H]

Synonym: CLM_0837

Alternate gene names: 226947976

Gene position: 897879-896998 (Counterclockwise)

Preceding gene: 226947984

Following gene: 226947955

Centisome position: 21.61

GC content: 37.19

Gene sequence:

>882_bases
ATGAAGATAGCAAGGATTCAATTTCTTTTGTCAATGTTGATTGTAGGAAGCATTGGTTTGTTCGTTAGGAGTATTCCGTT
CTCATCTGCGCAGATTGCACTGGTAAGAGGCATATTGGGCTGTGCATTTGTCTTTGTTTTTAGTTTAATGTCAGGTCAGA
AGATAAGTGGAAAGAATATAAAGGCAAACCTATGGATTTTGATTGCTTCAGGTATTGCACTCAGTGTAAACTGGATTCTT
CTTTTTCAAGCTTATAAGTACACAACCATATCCAATGCGACCATATGTTACTACTTCGCTCCTGTACTTGTAATGATTCT
GTCTCCACTCATTTTGAAGGAGCCATTAAGTGTATTAAAGGTACTGTGTATCGTTGCTGCCTTAGTGGGACTGGCTTGTA
TTGCAGGGGTAAGCAAAAAAGCCGGTGCCAATGATTTTGTAGGTATTCTATACGGTGTTGGATCAGCGGTTCTTTATGCA
ACTGTAATATTCTTAAATAAGTGCTTGAAGGATATTAAAGGAATTGAAAGCTCTATTGTACAGTTAGGGGTTTCAGCTAT
TTCACTGCTTGCCTACGTACTTATGAGCGAAGGATTTAATCTTGACGAAATGACAGTAACACCGATTGTTTTGCTTTTGA
TTGTAGGTGTCATACATACTGGAGTTGTTTATCTATTATATTTTTCATCTATGCGAGAACTTTCTGCTCAGAGCGTAGCA
GCTTTAAGTTATATTGATCCGGTAGTCGCTATCCTTTTAGCGTCCATATTTCTGCATGAAAAAATGACGATTGTACAGAT
AATTGGTGGTATTCTAATACTTGGGGCAACCTTTTTCAATGAAATATATGCTCAAAAAAAGAAGACTAGCAATATTCTAT
AG

Upstream 100 bases:

>100_bases
AAAATATAACTAACGTTCAATAAAACGAATAGTTGTAAAATATATTTTACCGTATTGCCATTGCGATTGCAAGCAAAAGG
CAGTTTAAAGGAGGATAATA

Downstream 100 bases:

>100_bases
TAAATTCTAGATTAGATAGCCAACTAATTTAACTAATAAATTTAGACTCAAAAAATGCCACTGCACATATGGAATATGGC
AGTCACAACAAATTTCACTT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKIARIQFLLSMLIVGSIGLFVRSIPFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNIKANLWILIASGIALSVNWIL
LFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLCIVAALVGLACIAGVSKKAGANDFVGILYGVGSAVLYA
TVIFLNKCLKDIKGIESSIVQLGVSAISLLAYVLMSEGFNLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVA
ALSYIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKKTSNIL

Sequences:

>Translated_293_residues
MKIARIQFLLSMLIVGSIGLFVRSIPFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNIKANLWILIASGIALSVNWIL
LFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLCIVAALVGLACIAGVSKKAGANDFVGILYGVGSAVLYA
TVIFLNKCLKDIKGIESSIVQLGVSAISLLAYVLMSEGFNLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVA
ALSYIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKKTSNIL
>Mature_293_residues
MKIARIQFLLSMLIVGSIGLFVRSIPFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNIKANLWILIASGIALSVNWIL
LFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLKVLCIVAALVGLACIAGVSKKAGANDFVGILYGVGSAVLYA
TVIFLNKCLKDIKGIESSIVQLGVSAISLLAYVLMSEGFNLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVA
ALSYIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKKTSNIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31527; Mature: 31527

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIARIQFLLSMLIVGSIGLFVRSIPFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KANLWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLK
EEEEEEEEECCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLCIVAALVGLACIAGVSKKAGANDFVGILYGVGSAVLYATVIFLNKCLKDIKGIESSIV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGVSAISLLAYVLMSEGFNLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSYIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKKTSNIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIARIQFLLSMLIVGSIGLFVRSIPFSSAQIALVRGILGCAFVFVFSLMSGQKISGKNI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
KANLWILIASGIALSVNWILLFQAYKYTTISNATICYYFAPVLVMILSPLILKEPLSVLK
EEEEEEEEECCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLCIVAALVGLACIAGVSKKAGANDFVGILYGVGSAVLYATVIFLNKCLKDIKGIESSIV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGVSAISLLAYVLMSEGFNLDEMTVTPIVLLLIVGVIHTGVVYLLYFSSMRELSAQSVA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSYIDPVVAILLASIFLHEKMTIVQIIGGILILGATFFNEIYAQKKKTSNIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377; 8316082 [H]