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The map label for this gene is 226947774

Identifier: 226947774

GI number: 226947774

Start: 674438

End: 676948

Strand: Direct

Name: 226947774

Synonym: CLM_0623

Alternate gene names: NA

Gene position: 674438-676948 (Clockwise)

Preceding gene: 226947773

Following gene: 226947777

Centisome position: 16.23

GC content: 30.11

Gene sequence:

>2511_bases
ATGTTTCAAAATAATAATGGAGCTGTTGTTAGGAAGCTAACAAAGCGTTCTATTAAGTCAAGTAAAAACTATATTGCTAT
TATTGCCATTACTTTAACAACACTTTTGTTTACAAGCATGTTTACTATTACAGGTAGCCTAAGAGCTGCTATAAAGGATA
GTGATATGCGAAAACTTGGAACCTCTGCTCATGCTGGATTAAAGCATTTAACAGGAGAGGAATATGAAAAAGCTTCTAAA
GATAAAAAAATCCATAACACATCTCATTCCATAATTATTGGAGATGCACAAGGAGTATCTTTTCATAAATTGCCCACAGA
GGTGAGGTGGGGCGAAGATAATTATGCAAAGTGGACGTTTAACTTTCCTACCCAGGGTAAAATGCCAACAAGTAAAAAGG
AAGTAGCTATGAGCAGCTTTGTACTTGATGCTCTCCATATTCCTCATAGGCTAGGAGAAAAAATTAAATTAACTGTTAAA
ACTGATGAGAAAATTTTCACAGATACTTTTATATTATGCGGTATATGGAAGGGAGATTCAGTAGCCTTTAGGCAAACAAT
TTGGCTTTCAAAATCTTATTGTGATGAAGTAGCACCTGTTATTGAATCAAAAGAAGGTGACAGTAAATTTACGGGATATA
TAGATAGTTTAATAATGTTTCCATCATCTTGGAATATTGAGAAAAATATAAATGAACTTGCTTCTAATTATAATATAGAC
GAGGAAAAAATAGCAGTTAATTCCGCCTATGATACAGCTGAAATTGATGTTGAAAATTTAATAGTTATTGCTTTTATATT
GATTATTATTTTTATTGCGGGATATTTATTAATTTATAATATCTTTTATATTTCAGTTGCACAGGATATTAGAAATTATG
GACTATTAAAAACAGTAGGTATGACTTCTAAACAAATAAGAAAAATGGTTCGATTTAAGGCGCTAATTTTATCCTGTATA
GGTATTCCTGTTGGGTTAATTTTAGGATGGCCCATTGGACGTATTTTAGTTCCTTATATTATAAATATTTTAGGTGAAGA
TATGCGTGTTGTTACAACTAGCAACCCTTTTGTATTTATATTTGCAGCACTTTTTAGTTTAATAACTGTGTATTTAAGTT
GTATTAAGCCAGCTAAAGTTGCATCAAAGGTTTCATCTATTGAAGCAGTACGATATAATGGAACAAATAAAAAGATTATA
TCAAGAAAGAAAACAAAATCTACTCATAGAGTAAAACCATTATCAATGGCTCTAGCCAATCTTAGAAGAAATGGTAAGAA
GGTTTTTGTAGTTGTTTTATCCTTTGCCCTTAGTTTAGTAATTCTTAATAGTACCTATTCTTATGTTCATTCTTTTGATT
TTGACAAATTTGTAGCTAGTACTAGTATATCAGATTTTTCAGTAGCAGATAGATCTATTATTAAAAGCTCAAGTCCTTTT
AATACTTCAGGTGTAAGTAATAATTTTATTAATGAAGTTAAGTCATTAAAGGGATTAGAAAGAATGGGAAATATTTATAT
GACTACTAGTCGTCAATATTGTACCAATGATGCGTATAAGCGTTTAAAAAAACATATTAATTCCCTAGATGATAAAAAAA
AGGAAGAAGTTATGAATTATTCAATAATGGTAAAAAAATTTTCAGGAGTAAATGTTTTTGGCTTTGATACTTGGCCATCA
GAATATATTAAAGTTATAGATGGATCTTTAGATAACAATAGTTGGAAAAATGGAGAAGGTATTTATGTAACTCCATGGAA
ACTTGTTGAAGATGGAAAATTAAGTATATATAAACCTGGAGACACTATTGATGTAGACTTTGGCGATGGTAAAAGAAAAA
ATTATAAAGTATTAGCAATAGTAGATTATGCTGAAGCCTTTCAGTCACCACAGAATGTTGATCAGGGATTAGAATATATA
CTTCCTTCAAAAGAGTTTTTATCTAATTTTGGTTCAATGAAACCAATGCGTACTATTTTTAATGTGGATGATAAAAATCT
TGATAAAACAGAAAAATGGCTTAAAGATTACTGTACTAATAAAGAGTCATCCTTAGACTTTTGGTCTAGGAAAACATTGC
AAAAGCAATTTAGTAGTCTTACAATAATGTATACTGCTATAGGAGGTGCTCTATGTTTAATTCTTGCAATAATAGGAATA
CTAAACTTTATTAATTCTATGATTACATCTATTATTACAAGAAGAAGAGAACTTGCAATGCTTCAAGCTGTTGGTATGAC
AGATAAACAAATAAGATCTATGCTAATTATTGAAGGATCTGGGTATGCTGTTTTAGGATTGGTTTTATCTATAATACTAG
GGAGTATTGCAAATGTTACCTTAGTTCCTGCTCTGGGTGCTGATCTTTATTACTTTACCTGGAAGTTTACTTTAACTCCT
ATACTACTTTGTATTATTCCCTTAATTTTAATAACAGCTTTAGTTCCAATTTTATGCTATCATAGATTATCAAAGGGTAG
TGTTGTTGAACAACTAAGGATTGTAGAATAA

Upstream 100 bases:

>100_bases
ACTATTGTAATGATTACTCATAACAATGAAATTGCTCAGCTTGCTGATAGAATCATTCGTATTGAAGACGGTAAAGTTAT
GGTCTAAAGGAGGATAAAAT

Downstream 100 bases:

>100_bases
TGAATTAAATTATAAAGGATTATAATGAAAAGGATGCTATGTTTTAGTATCCTTTTTTATTTATATATTATCTTAAGTCC
CTAAAAATACTTAAACAATT

Product: efflux ABC transporter permease

Products: NA

Alternate protein names: Efflux ABC Transporter Permease Protein; ABC Transporter Permease Protein; Permease

Number of amino acids: Translated: 836; Mature: 836

Protein sequence:

>836_residues
MFQNNNGAVVRKLTKRSIKSSKNYIAIIAITLTTLLFTSMFTITGSLRAAIKDSDMRKLGTSAHAGLKHLTGEEYEKASK
DKKIHNTSHSIIIGDAQGVSFHKLPTEVRWGEDNYAKWTFNFPTQGKMPTSKKEVAMSSFVLDALHIPHRLGEKIKLTVK
TDEKIFTDTFILCGIWKGDSVAFRQTIWLSKSYCDEVAPVIESKEGDSKFTGYIDSLIMFPSSWNIEKNINELASNYNID
EEKIAVNSAYDTAEIDVENLIVIAFILIIIFIAGYLLIYNIFYISVAQDIRNYGLLKTVGMTSKQIRKMVRFKALILSCI
GIPVGLILGWPIGRILVPYIINILGEDMRVVTTSNPFVFIFAALFSLITVYLSCIKPAKVASKVSSIEAVRYNGTNKKII
SRKKTKSTHRVKPLSMALANLRRNGKKVFVVVLSFALSLVILNSTYSYVHSFDFDKFVASTSISDFSVADRSIIKSSSPF
NTSGVSNNFINEVKSLKGLERMGNIYMTTSRQYCTNDAYKRLKKHINSLDDKKKEEVMNYSIMVKKFSGVNVFGFDTWPS
EYIKVIDGSLDNNSWKNGEGIYVTPWKLVEDGKLSIYKPGDTIDVDFGDGKRKNYKVLAIVDYAEAFQSPQNVDQGLEYI
LPSKEFLSNFGSMKPMRTIFNVDDKNLDKTEKWLKDYCTNKESSLDFWSRKTLQKQFSSLTIMYTAIGGALCLILAIIGI
LNFINSMITSIITRRRELAMLQAVGMTDKQIRSMLIIEGSGYAVLGLVLSIILGSIANVTLVPALGADLYYFTWKFTLTP
ILLCIIPLILITALVPILCYHRLSKGSVVEQLRIVE

Sequences:

>Translated_836_residues
MFQNNNGAVVRKLTKRSIKSSKNYIAIIAITLTTLLFTSMFTITGSLRAAIKDSDMRKLGTSAHAGLKHLTGEEYEKASK
DKKIHNTSHSIIIGDAQGVSFHKLPTEVRWGEDNYAKWTFNFPTQGKMPTSKKEVAMSSFVLDALHIPHRLGEKIKLTVK
TDEKIFTDTFILCGIWKGDSVAFRQTIWLSKSYCDEVAPVIESKEGDSKFTGYIDSLIMFPSSWNIEKNINELASNYNID
EEKIAVNSAYDTAEIDVENLIVIAFILIIIFIAGYLLIYNIFYISVAQDIRNYGLLKTVGMTSKQIRKMVRFKALILSCI
GIPVGLILGWPIGRILVPYIINILGEDMRVVTTSNPFVFIFAALFSLITVYLSCIKPAKVASKVSSIEAVRYNGTNKKII
SRKKTKSTHRVKPLSMALANLRRNGKKVFVVVLSFALSLVILNSTYSYVHSFDFDKFVASTSISDFSVADRSIIKSSSPF
NTSGVSNNFINEVKSLKGLERMGNIYMTTSRQYCTNDAYKRLKKHINSLDDKKKEEVMNYSIMVKKFSGVNVFGFDTWPS
EYIKVIDGSLDNNSWKNGEGIYVTPWKLVEDGKLSIYKPGDTIDVDFGDGKRKNYKVLAIVDYAEAFQSPQNVDQGLEYI
LPSKEFLSNFGSMKPMRTIFNVDDKNLDKTEKWLKDYCTNKESSLDFWSRKTLQKQFSSLTIMYTAIGGALCLILAIIGI
LNFINSMITSIITRRRELAMLQAVGMTDKQIRSMLIIEGSGYAVLGLVLSIILGSIANVTLVPALGADLYYFTWKFTLTP
ILLCIIPLILITALVPILCYHRLSKGSVVEQLRIVE
>Mature_836_residues
MFQNNNGAVVRKLTKRSIKSSKNYIAIIAITLTTLLFTSMFTITGSLRAAIKDSDMRKLGTSAHAGLKHLTGEEYEKASK
DKKIHNTSHSIIIGDAQGVSFHKLPTEVRWGEDNYAKWTFNFPTQGKMPTSKKEVAMSSFVLDALHIPHRLGEKIKLTVK
TDEKIFTDTFILCGIWKGDSVAFRQTIWLSKSYCDEVAPVIESKEGDSKFTGYIDSLIMFPSSWNIEKNINELASNYNID
EEKIAVNSAYDTAEIDVENLIVIAFILIIIFIAGYLLIYNIFYISVAQDIRNYGLLKTVGMTSKQIRKMVRFKALILSCI
GIPVGLILGWPIGRILVPYIINILGEDMRVVTTSNPFVFIFAALFSLITVYLSCIKPAKVASKVSSIEAVRYNGTNKKII
SRKKTKSTHRVKPLSMALANLRRNGKKVFVVVLSFALSLVILNSTYSYVHSFDFDKFVASTSISDFSVADRSIIKSSSPF
NTSGVSNNFINEVKSLKGLERMGNIYMTTSRQYCTNDAYKRLKKHINSLDDKKKEEVMNYSIMVKKFSGVNVFGFDTWPS
EYIKVIDGSLDNNSWKNGEGIYVTPWKLVEDGKLSIYKPGDTIDVDFGDGKRKNYKVLAIVDYAEAFQSPQNVDQGLEYI
LPSKEFLSNFGSMKPMRTIFNVDDKNLDKTEKWLKDYCTNKESSLDFWSRKTLQKQFSSLTIMYTAIGGALCLILAIIGI
LNFINSMITSIITRRRELAMLQAVGMTDKQIRSMLIIEGSGYAVLGLVLSIILGSIANVTLVPALGADLYYFTWKFTLTP
ILLCIIPLILITALVPILCYHRLSKGSVVEQLRIVE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93903; Mature: 93903

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQNNNGAVVRKLTKRSIKSSKNYIAIIAITLTTLLFTSMFTITGSLRAAIKDSDMRKLG
CCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
TSAHAGLKHLTGEEYEKASKDKKIHNTSHSIIIGDAQGVSFHKLPTEVRWGEDNYAKWTF
CHHHHHHHHCCCHHHHHHHCCCHHCCCCCEEEEECCCCCEEECCCCCEECCCCCCEEEEE
NFPTQGKMPTSKKEVAMSSFVLDALHIPHRLGEKIKLTVKTDEKIFTDTFILCGIWKGDS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCEEEEEECCCCC
VAFRQTIWLSKSYCDEVAPVIESKEGDSKFTGYIDSLIMFPSSWNIEKNINELASNYNID
CHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
EEKIAVNSAYDTAEIDVENLIVIAFILIIIFIAGYLLIYNIFYISVAQDIRNYGLLKTVG
HHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
MTSKQIRKMVRFKALILSCIGIPVGLILGWPIGRILVPYIINILGEDMRVVTTSNPFVFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHH
FAALFSLITVYLSCIKPAKVASKVSSIEAVRYNGTNKKIISRKKTKSTHRVKPLSMALAN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHCCCHHHHHHHH
LRRNGKKVFVVVLSFALSLVILNSTYSYVHSFDFDKFVASTSISDFSVADRSIIKSSSPF
HHCCCCEEHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCC
NTSGVSNNFINEVKSLKGLERMGNIYMTTSRQYCTNDAYKRLKKHINSLDDKKKEEVMNY
CCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SIMVKKFSGVNVFGFDTWPSEYIKVIDGSLDNNSWKNGEGIYVTPWKLVEDGKLSIYKPG
HEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCEEEECCC
DTIDVDFGDGKRKNYKVLAIVDYAEAFQSPQNVDQGLEYILPSKEFLSNFGSMKPMRTIF
CEEEEECCCCCCCCEEEEEEEEHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHH
NVDDKNLDKTEKWLKDYCTNKESSLDFWSRKTLQKQFSSLTIMYTAIGGALCLILAIIGI
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNFINSMITSIITRRRELAMLQAVGMTDKQIRSMLIIEGSGYAVLGLVLSIILGSIANVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCEE
LVPALGADLYYFTWKFTLTPILLCIIPLILITALVPILCYHRLSKGSVVEQLRIVE
EEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure
MFQNNNGAVVRKLTKRSIKSSKNYIAIIAITLTTLLFTSMFTITGSLRAAIKDSDMRKLG
CCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
TSAHAGLKHLTGEEYEKASKDKKIHNTSHSIIIGDAQGVSFHKLPTEVRWGEDNYAKWTF
CHHHHHHHHCCCHHHHHHHCCCHHCCCCCEEEEECCCCCEEECCCCCEECCCCCCEEEEE
NFPTQGKMPTSKKEVAMSSFVLDALHIPHRLGEKIKLTVKTDEKIFTDTFILCGIWKGDS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCEEEEEECCCCC
VAFRQTIWLSKSYCDEVAPVIESKEGDSKFTGYIDSLIMFPSSWNIEKNINELASNYNID
CHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
EEKIAVNSAYDTAEIDVENLIVIAFILIIIFIAGYLLIYNIFYISVAQDIRNYGLLKTVG
HHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC
MTSKQIRKMVRFKALILSCIGIPVGLILGWPIGRILVPYIINILGEDMRVVTTSNPFVFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHH
FAALFSLITVYLSCIKPAKVASKVSSIEAVRYNGTNKKIISRKKTKSTHRVKPLSMALAN
HHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHCCCHHHHHHHH
LRRNGKKVFVVVLSFALSLVILNSTYSYVHSFDFDKFVASTSISDFSVADRSIIKSSSPF
HHCCCCEEHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCC
NTSGVSNNFINEVKSLKGLERMGNIYMTTSRQYCTNDAYKRLKKHINSLDDKKKEEVMNY
CCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SIMVKKFSGVNVFGFDTWPSEYIKVIDGSLDNNSWKNGEGIYVTPWKLVEDGKLSIYKPG
HEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCEEEECCC
DTIDVDFGDGKRKNYKVLAIVDYAEAFQSPQNVDQGLEYILPSKEFLSNFGSMKPMRTIF
CEEEEECCCCCCCCEEEEEEEEHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHH
NVDDKNLDKTEKWLKDYCTNKESSLDFWSRKTLQKQFSSLTIMYTAIGGALCLILAIIGI
CCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNFINSMITSIITRRRELAMLQAVGMTDKQIRSMLIIEGSGYAVLGLVLSIILGSIANVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCEE
LVPALGADLYYFTWKFTLTPILLCIIPLILITALVPILCYHRLSKGSVVEQLRIVE
EEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA