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The map label for this gene is mcp1 [H]

Identifier: 226947751

GI number: 226947751

Start: 647366

End: 649396

Strand: Direct

Name: mcp1 [H]

Synonym: CLM_0600

Alternate gene names: 226947751

Gene position: 647366-649396 (Clockwise)

Preceding gene: 226947750

Following gene: 226947752

Centisome position: 15.58

GC content: 27.97

Gene sequence:

>2031_bases
ATGAAGTTTAAATTTAAAAATACTAAGGATAAAAATTTTATAAGTGTAAAAAGTGTTATAAATATACAAATATTAGGTTT
GATTATTTTGATTTGTGGGGTCTTAGGAATTGTGTCCTATAAGAGTGCTTCTAAAGCTCTAACTAAAAATATTAAAATGG
AACTTGAAAATAAGGCCAAAAATGGATCAACTATCTTGGGTAATAGAATGAATGAAGTAAAGGAGAGATTACAAATAATA
GCCAATTGGCCAGAAATAAAATCTATGGATTTAAAAAATCAAAAGTACCAATTGGAAGATGAAGCTAAATCCTGGGGATT
TAAAGATTTTAAAATAGTAAATTTACAAGGTAATCAATATACTATGAATAGCAATGAAATAGAAAATATTTCTGGAAAGG
GATACTTTAATAGAATATTAAAAGGAGATACATTTATAATAGATAGTGATATAGATAAGAACACTAATGTTCCTTTAATA
AAAGTAGTTGTGCCTATTAAATCCAATGATGAAAAAGTAGTAGGTGCTTTAATAGGTTCTTTAGATATAAAAGATATAAA
TAAGTTAGTAAATGATGCAAAATCAAATGATAAAGAAGAAATCGGTTTTGTAATTAATAAAGAAGGATATTATATAGCAG
ATGGTGATATTAATTTAGTTTTAAAAAGAGGCAATGATTTAAAAAATTATAGTAATGATCCAAAGTTTGTAGAACTTTTA
AATTTTCAGAAAAAAATGATTAACGGAGAAAATGGCTTTGGAGAATATAAATACAATAATATTAGAAGATTTATGGCTTA
TGTGCCAGTTCCAGGCACAGAATGGTCTATGGCTATAGCTGTTGAAAAAAATTATTTGTTTAAAGATATATATACGCTAA
GAATAGTGATATTAATTTCAACTATTTTATTTATAATTTTAGGTATAATAATATCCAATATTATTTCTAAAAATATTAAA
GATCCCCTTGTTAAAATGAAAGAACATGCAGAGCAATTAGAAAAGTGTAATTTAACATATAAAAATTCTATTAATAGAAA
AGATGAATTTGGGGAAACAGCTAGAGCTTTAAATGAAGCTAGCAATATATTAAATCAAACTATAAATTCTGTAAAGGATG
AAAGCCAAAATATATTACAAAGCAGTAATTGTGCAAAAGAAACTTTTGATAAGGTAAATGCTGAGGTACAACAAATAACT
GCATTTACTGAAGAGATTTCTGCTAATATGGAGGAATCTTCAGCTGGAATAGAAGAGATGGCATCTATGACTGCTTCTGT
TAAAGAAGATATGAGTATTACTAAGAAAAAAGCAAAAGAAGGACTTGATTTAGCAATAAACATTAAGGAAAAGGCAGAAA
GTGTAAATGAAGATGCTTGTAGCTCAATGAGTGAAGTGGAAAAAATATATGAAAACTCAAAGGGAAAATTAGAAAAAGCT
ATTCGTGAAGCTCAGGTTGTAGAGAATATATCTGAAATGGCTGAAAGTATTTTAGGTATAGCTGAAAAGACGAACTTATT
AGCTTTAAATGCAGCCATTGAGGCTGCTAGAGCAGGAGAACAGGGGAGAGGCTTTGCAGTAGTAGCAGAAGAAGTAAGAA
AATTAGCAGAGCAATCCTCTAGTGCAGTTGAAAATATTCAGGTTAATGTTAAGACTGTATTAAAAGCAGTAAGTGAGCTT
TCATCTTCTTCCGAATTTGTTTTGGAACTTATAGAAGAGAACGTATTAAAAGATTATAAAAAGCTTATAGATGTGAGTGT
ACAGTATAAAAATGATGGAAATATTGTTAAAGAGTTGATTGAGAATTTTTCAAATTTATCAGAAAAGACTTCTAAAGCTA
TTGAACAAATAGCAGTAGGTATGGAAGGAATGTCAGGATCTGTAATAGAAGTAGCAGAATCTTCAGGTGAAATTGCAGAA
AAAATAAGCAATGTAAATCAACAAAATGAATCAATATTGCAAGAAAATGAAAGAAATTTAGAAATATCACAACAATTAGT
GAATACAATGAATGAATTTCAAAGTATTTAG

Upstream 100 bases:

>100_bases
AAATATTGGAATTATTTATTAAAAAAATATATATAAATTCTTTTAATTTACGATTATGTATATAATTAGTCAGTAGTTAT
ATATAACGAGGAGGAAATTT

Downstream 100 bases:

>100_bases
AGGTATATAATATAAAATTAAGATAAAGTTATAAACAATATTTTATGTATTGTTTATAACTTTATTTTTACAAAAAAATT
GAATAATATATATATATTTG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MKFKFKNTKDKNFISVKSVINIQILGLIILICGVLGIVSYKSASKALTKNIKMELENKAKNGSTILGNRMNEVKERLQII
ANWPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLI
KVVVPIKSNDEKVVGALIGSLDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELL
NFQKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTILFIILGIIISNIISKNIK
DPLVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQIT
AFTEEISANMEESSAGIEEMASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKGKLEKA
IREAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSSAVENIQVNVKTVLKAVSEL
SSSSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAE
KISNVNQQNESILQENERNLEISQQLVNTMNEFQSI

Sequences:

>Translated_676_residues
MKFKFKNTKDKNFISVKSVINIQILGLIILICGVLGIVSYKSASKALTKNIKMELENKAKNGSTILGNRMNEVKERLQII
ANWPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLI
KVVVPIKSNDEKVVGALIGSLDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELL
NFQKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTILFIILGIIISNIISKNIK
DPLVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQIT
AFTEEISANMEESSAGIEEMASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKGKLEKA
IREAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSSAVENIQVNVKTVLKAVSEL
SSSSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAE
KISNVNQQNESILQENERNLEISQQLVNTMNEFQSI
>Mature_676_residues
MKFKFKNTKDKNFISVKSVINIQILGLIILICGVLGIVSYKSASKALTKNIKMELENKAKNGSTILGNRMNEVKERLQII
ANWPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQYTMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLI
KVVVPIKSNDEKVVGALIGSLDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELL
NFQKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILISTILFIILGIIISNIISKNIK
DPLVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEASNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQIT
AFTEEISANMEESSAGIEEMASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKGKLEKA
IREAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSSSAVENIQVNVKTVLKAVSEL
SSSSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELIENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAE
KISNVNQQNESILQENERNLEISQQLVNTMNEFQSI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=355, Percent_Identity=26.1971830985915, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1788195, Length=314, Percent_Identity=26.7515923566879, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=29.9270072992701, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI2367378, Length=278, Percent_Identity=28.0575539568345, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788194, Length=259, Percent_Identity=28.957528957529, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 75526; Mature: 75526

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKFKNTKDKNFISVKSVINIQILGLIILICGVLGIVSYKSASKALTKNIKMELENKAK
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGSTILGNRMNEVKERLQIIANWPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQY
CCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCEE
TMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKVVVPIKSNDEKVVGALIGS
ECCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHC
LDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELL
CCHHHHHHHHHHHCCCCCHHCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHH
NFQKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILIS
HHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
TILFIILGIIISNIISKNIKDPLVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH
SNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITAFTEEISANMEESSAGIEEM
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHH
ASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKGKLEKA
HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH
IREAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SAVENIQVNVKTVLKAVSELSSSSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
ENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAEKISNVNQQNESILQENERNL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCH
EISQQLVNTMNEFQSI
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFKFKNTKDKNFISVKSVINIQILGLIILICGVLGIVSYKSASKALTKNIKMELENKAK
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NGSTILGNRMNEVKERLQIIANWPEIKSMDLKNQKYQLEDEAKSWGFKDFKIVNLQGNQY
CCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCEE
TMNSNEIENISGKGYFNRILKGDTFIIDSDIDKNTNVPLIKVVVPIKSNDEKVVGALIGS
ECCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHC
LDIKDINKLVNDAKSNDKEEIGFVINKEGYYIADGDINLVLKRGNDLKNYSNDPKFVELL
CCHHHHHHHHHHHCCCCCHHCCEEECCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHH
NFQKKMINGENGFGEYKYNNIRRFMAYVPVPGTEWSMAIAVEKNYLFKDIYTLRIVILIS
HHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
TILFIILGIIISNIISKNIKDPLVKMKEHAEQLEKCNLTYKNSINRKDEFGETARALNEA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHH
SNILNQTINSVKDESQNILQSSNCAKETFDKVNAEVQQITAFTEEISANMEESSAGIEEM
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHH
ASMTASVKEDMSITKKKAKEGLDLAINIKEKAESVNEDACSSMSEVEKIYENSKGKLEKA
HHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH
IREAQVVENISEMAESILGIAEKTNLLALNAAIEAARAGEQGRGFAVVAEEVRKLAEQSS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
SAVENIQVNVKTVLKAVSELSSSSEFVLELIEENVLKDYKKLIDVSVQYKNDGNIVKELI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHH
ENFSNLSEKTSKAIEQIAVGMEGMSGSVIEVAESSGEIAEKISNVNQQNESILQENERNL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCH
EISQQLVNTMNEFQSI
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]