| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is ywbO [H]
Identifier: 226947509
GI number: 226947509
Start: 328781
End: 329386
Strand: Direct
Name: ywbO [H]
Synonym: CLM_0343
Alternate gene names: 226947509
Gene position: 328781-329386 (Clockwise)
Preceding gene: 226947508
Following gene: 226947510
Centisome position: 7.91
GC content: 27.56
Gene sequence:
>606_bases ATGTCATTAAATATTAAAGTATATTTTGATTTTGTTTGTCCATTTTGTTTTTTAGGAGAGGAGAGTTTAAGTGAAGCCAT AAAAGGAAAGTATGTAAATATTCAATGGATGCCCTTTGAATTAAGACCAGAGCCATCACCTAGAATAGATCCTTGGAATG ATCCTTCAAAATTAAATGCCTGGAATAATTTCATTGAACCCATAGCTAATAAGTTAGGAATAGATATGAAATTACCGAAG CTTTCACCTCATCCATATACTAACTTAGCTTTTGAAGGATATCATTATGCAAGTGAGCATGGAAAAGGAGATGAATATAT TAAAAGAGTTTTTAAGGGATTTTTCCAAGAAGAATTAGATATTGGAAAAATTGAGATATTAGCTAATTTATCTGAAGAAA TAGGTTTAAATAAAGAAGAATTTATAAAAGCTTTAAAAAACAGAAAATATAAGGATAAGCAAGAAAAAGCATTAAAGCAT GCTTATGAAGAAGCTAATATTACAGCAGTACCTACAATGATTATAGGTGATGAAGTAGTTCAGGGTAATACTTCAAAAGA AAGTTTAGAAAAAATAATAAATAAACAATTAATAAAAAATAATTAA
Upstream 100 bases:
>100_bases AATTCATAACTTGTGGAAATAAGTTAATTAGCATAGATGAAAATTTTTTTGGAATTGTTGTAATCAAAATAGTTACAACT AAAAATAGGAGGTTATTAAA
Downstream 100 bases:
>100_bases TTTTATAAAGGAAAGGAAGAGATATTATGAAGATTGCTTTAATTGGATCAACAGGAAATGCAGGAAAGGTAATATTAAAG GAGGCCCTAAGCAGAGGACA
Product: DSBA-like thioredoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSLNIKVYFDFVCPFCFLGEESLSEAIKGKYVNIQWMPFELRPEPSPRIDPWNDPSKLNAWNNFIEPIANKLGIDMKLPK LSPHPYTNLAFEGYHYASEHGKGDEYIKRVFKGFFQEELDIGKIEILANLSEEIGLNKEEFIKALKNRKYKDKQEKALKH AYEEANITAVPTMIIGDEVVQGNTSKESLEKIINKQLIKNN
Sequences:
>Translated_201_residues MSLNIKVYFDFVCPFCFLGEESLSEAIKGKYVNIQWMPFELRPEPSPRIDPWNDPSKLNAWNNFIEPIANKLGIDMKLPK LSPHPYTNLAFEGYHYASEHGKGDEYIKRVFKGFFQEELDIGKIEILANLSEEIGLNKEEFIKALKNRKYKDKQEKALKH AYEEANITAVPTMIIGDEVVQGNTSKESLEKIINKQLIKNN >Mature_200_residues SLNIKVYFDFVCPFCFLGEESLSEAIKGKYVNIQWMPFELRPEPSPRIDPWNDPSKLNAWNNFIEPIANKLGIDMKLPKL SPHPYTNLAFEGYHYASEHGKGDEYIKRVFKGFFQEELDIGKIEILANLSEEIGLNKEEFIKALKNRKYKDKQEKALKHA YEEANITAVPTMIIGDEVVQGNTSKESLEKIINKQLIKNN
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23199; Mature: 23068
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNIKVYFDFVCPFCFLGEESLSEAIKGKYVNIQWMPFELRPEPSPRIDPWNDPSKLNA CCEEEEEEHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHH WNNFIEPIANKLGIDMKLPKLSPHPYTNLAFEGYHYASEHGKGDEYIKRVFKGFFQEELD HHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCEEHHCCCCCHHHHHHHHHHHHHHHCC IGKIEILANLSEEIGLNKEEFIKALKNRKYKDKQEKALKHAYEEANITAVPTMIIGDEVV CCHHHHEECCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCHHEECCHHH QGNTSKESLEKIINKQLIKNN CCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SLNIKVYFDFVCPFCFLGEESLSEAIKGKYVNIQWMPFELRPEPSPRIDPWNDPSKLNA CEEEEEEHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHH WNNFIEPIANKLGIDMKLPKLSPHPYTNLAFEGYHYASEHGKGDEYIKRVFKGFFQEELD HHHHHHHHHHHHCCCEECCCCCCCCCCCCEECCCEEHHCCCCCHHHHHHHHHHHHHHHCC IGKIEILANLSEEIGLNKEEFIKALKNRKYKDKQEKALKHAYEEANITAVPTMIIGDEVV CCHHHHEECCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCHHEECCHHH QGNTSKESLEKIINKQLIKNN CCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]