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The map label for this gene is yvcP [H]

Identifier: 226947497

GI number: 226947497

Start: 316056

End: 316832

Strand: Direct

Name: yvcP [H]

Synonym: CLM_0331

Alternate gene names: 226947497

Gene position: 316056-316832 (Clockwise)

Preceding gene: 226947496

Following gene: 226947498

Centisome position: 7.61

GC content: 26.51

Gene sequence:

>777_bases
TTGAGAAAATTATATATAAATAATATTTTTAATAAATGGTACAATTATATATATAAATGTTTAAAGGTTGTGATAATTTT
GTATAGTATTATGATTATAGAAGATGACAAGAAAATGGCTAAGCTTATAGAAAATCATTTAGAGCGATATGGATATAAAA
CATTTTCAATTAAAGATTTTTCAAATATAAAAGATGAAGTTCTAGAATGTAAGCCAGATCTTATTTTAATGGATATAAAT
CTTCCTTTTTTTGACGGATTTTATTGGTGTAGTGATATAAGAAATCATTCTAAAGTACCTATAATATTTATATCAGCTAG
AGACTCAGATATGGATCAGGTTATGGCAATAGAGAACGGTGGAGATGATTTTATAACAAAGCCCTTTTCTTATTATGTAC
TATTAGCAAAGATAAAAGGTGTATTAAGAAGAGTATATGGTAGTTATGCCAAAAATGATACGGATTTTTTAAAGATTGAT
GATTTAATATTATATACAAACAAGAGTATGTTAGAATTTAAAGGGAGAAAAACTGAGCTTAGTAAAAATGAATTTTCCCT
TTTATTATATCTTCTTAAAAATATAAATAAAATTGTTTCAAGAGATACTTTGTTGGAGATTCTTTGGAGTGATACTGATT
TCATTGACGATAATACTCTTTCTGTTAATGTTACAAGACTTAGAAAAAGGCTAGAAGAAGTGGGCATTACTAATGCTATA
GAGACAAAACGTGGCCAAGGATATATGCTAATTAATAAATGGGAGAGCAAAGAGTAG

Upstream 100 bases:

>100_bases
TAATAAAATTATGTTATTAATATTTAGATATGTAGATTTAAATAAAGGCAATTTTGTTCATAATTACTCCTCTAAATTTT
ATTTAGAGGAGATTTTTCTA

Downstream 100 bases:

>100_bases
GTGAAGAAAATGAAATTTATAGATTTTCTAAAAGATAGGATAGCTTATATAATAGTATATTTTATAAGTATATCTTTAGT
TATTTTGATAATGCATTTGA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRKLYINNIFNKWYNYIYKCLKVVIILYSIMIIEDDKKMAKLIENHLERYGYKTFSIKDFSNIKDEVLECKPDLILMDIN
LPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFSYYVLLAKIKGVLRRVYGSYAKNDTDFLKID
DLILYTNKSMLEFKGRKTELSKNEFSLLLYLLKNINKIVSRDTLLEILWSDTDFIDDNTLSVNVTRLRKRLEEVGITNAI
ETKRGQGYMLINKWESKE

Sequences:

>Translated_258_residues
MRKLYINNIFNKWYNYIYKCLKVVIILYSIMIIEDDKKMAKLIENHLERYGYKTFSIKDFSNIKDEVLECKPDLILMDIN
LPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFSYYVLLAKIKGVLRRVYGSYAKNDTDFLKID
DLILYTNKSMLEFKGRKTELSKNEFSLLLYLLKNINKIVSRDTLLEILWSDTDFIDDNTLSVNVTRLRKRLEEVGITNAI
ETKRGQGYMLINKWESKE
>Mature_258_residues
MRKLYINNIFNKWYNYIYKCLKVVIILYSIMIIEDDKKMAKLIENHLERYGYKTFSIKDFSNIKDEVLECKPDLILMDIN
LPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENGGDDFITKPFSYYVLLAKIKGVLRRVYGSYAKNDTDFLKID
DLILYTNKSMLEFKGRKTELSKNEFSLLLYLLKNINKIVSRDTLLEILWSDTDFIDDNTLSVNVTRLRKRLEEVGITNAI
ETKRGQGYMLINKWESKE

Specific function: Member of the two-component regulatory system yvcQ/yvcP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=30.1801801801802, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=30.7017543859649, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786911, Length=207, Percent_Identity=28.9855072463768, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=26.7857142857143, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=28.8793103448276, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=28.0701754385965, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=27.4774774774775, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789809, Length=233, Percent_Identity=26.6094420600858, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=27.3127753303965, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=25.7918552036199, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1789402, Length=228, Percent_Identity=28.9473684210526, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=29.1479820627803, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=27.0742358078603, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI145693140, Length=242, Percent_Identity=28.5123966942149, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 30515; Mature: 30515

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLYINNIFNKWYNYIYKCLKVVIILYSIMIIEDDKKMAKLIENHLERYGYKTFSIKDF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCEEEECCH
SNIKDEVLECKPDLILMDINLPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENG
HHHHHHHHHCCCCEEEEEECCCHHCCHHHHHHHCCCCCCCEEEEECCCCCCHHEEEEECC
GDDFITKPFSYYVLLAKIKGVLRRVYGSYAKNDTDFLKIDDLILYTNKSMLEFKGRKTEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCHHEEECCCCCCC
SKNEFSLLLYLLKNINKIVSRDTLLEILWSDTDFIDDNTLSVNVTRLRKRLEEVGITNAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHH
ETKRGQGYMLINKWESKE
HCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRKLYINNIFNKWYNYIYKCLKVVIILYSIMIIEDDKKMAKLIENHLERYGYKTFSIKDF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCCCEEEECCH
SNIKDEVLECKPDLILMDINLPFFDGFYWCSDIRNHSKVPIIFISARDSDMDQVMAIENG
HHHHHHHHHCCCCEEEEEECCCHHCCHHHHHHHCCCCCCCEEEEECCCCCCHHEEEEECC
GDDFITKPFSYYVLLAKIKGVLRRVYGSYAKNDTDFLKIDDLILYTNKSMLEFKGRKTEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCHHEEECCCCCCC
SKNEFSLLLYLLKNINKIVSRDTLLEILWSDTDFIDDNTLSVNVTRLRKRLEEVGITNAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHH
ETKRGQGYMLINKWESKE
HCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]