Click here to switch to the map view.

The map label for this gene is dnaJ [H]

Identifier: 226947410

GI number: 226947410

Start: 222482

End: 223081

Strand: Reverse

Name: dnaJ [H]

Synonym: CLM_0238

Alternate gene names: 226947410

Gene position: 223081-222482 (Counterclockwise)

Preceding gene: 226947411

Following gene: 226947409

Centisome position: 5.37

GC content: 29.17

Gene sequence:

>600_bases
ATGAATCCCTATGAAATTTTAGGAATAAATAAAAATGCTTCTAAAGAAGAAATACAACAAGCTTATAGAAAACTAGCTAA
AAAATATCATCCTGATCAATATGGTAATAATCCTCTTAGAGATTTGGCTGAGCAAAAAATGAGGGAAATTAATGAAGCCT
ATGATTATTTAATGAAAAATAATAACTCTCAAAGCTATAATTCAAATAATTATAATGGTAGCTATAATAATCATTCTTCT
AATGATTATGCTTCTATAAGAGCTGATATAGATAGAGGAAATATATCCTCTGCAGAGCAAAAATTAAATAGTATAAATGT
GAGAAATGCAGAATGGTACTACCTTATGGGACGTGTAAATTATTCTAAAGGTTGGTATGATGTAGCCTATAATTATTTTA
ATAATGCCTATAGCTTAGATCCTTCAAACTTTGAGTATAGAGATGCTTTAGACAAAATGAGCAGAAATAATAGCTCTTAT
AGAAAGCCTTACTACTCTGAGAGAAGAAGTGATCCTGATATGTGTAAAATTTGTGGTACCCTTTATTGTATAGATTGTTG
TTGTGAATGTTGTGGAGGAGATTTTATTAGTTGTTGCTAA

Upstream 100 bases:

>100_bases
AATATGCCTATTGTAAAGAATAAAGGTTTATTATATAATATTTTACAATTTGGTTTAATGGAAAAAATGGAACGCGTATT
AAAAGGAGTGAATATAAATA

Downstream 100 bases:

>100_bases
AATATTTTGGGGAGATGATGGTCTATGAAAACTACCCCTTTAAAATCTTCAAATATAGCTAAAGGTGGAATATTTACAGC
TATAAGTTTTTTACTTATTT

Product: molecular chaperone, DnaJ family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNPYEILGINKNASKEEIQQAYRKLAKKYHPDQYGNNPLRDLAEQKMREINEAYDYLMKNNNSQSYNSNNYNGSYNNHSS
NDYASIRADIDRGNISSAEQKLNSINVRNAEWYYLMGRVNYSKGWYDVAYNYFNNAYSLDPSNFEYRDALDKMSRNNSSY
RKPYYSERRSDPDMCKICGTLYCIDCCCECCGGDFISCC

Sequences:

>Translated_199_residues
MNPYEILGINKNASKEEIQQAYRKLAKKYHPDQYGNNPLRDLAEQKMREINEAYDYLMKNNNSQSYNSNNYNGSYNNHSS
NDYASIRADIDRGNISSAEQKLNSINVRNAEWYYLMGRVNYSKGWYDVAYNYFNNAYSLDPSNFEYRDALDKMSRNNSSY
RKPYYSERRSDPDMCKICGTLYCIDCCCECCGGDFISCC
>Mature_199_residues
MNPYEILGINKNASKEEIQQAYRKLAKKYHPDQYGNNPLRDLAEQKMREINEAYDYLMKNNNSQSYNSNNYNGSYNNHSS
NDYASIRADIDRGNISSAEQKLNSINVRNAEWYYLMGRVNYSKGWYDVAYNYFNNAYSLDPSNFEYRDALDKMSRNNSSY
RKPYYSERRSDPDMCKICGTLYCIDCCCECCGGDFISCC

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 23274; Mature: 23274

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYEILGINKNASKEEIQQAYRKLAKKYHPDQYGNNPLRDLAEQKMREINEAYDYLMKN
CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NNSQSYNSNNYNGSYNNHSSNDYASIRADIDRGNISSAEQKLNSINVRNAEWYYLMGRVN
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEE
YSKGWYDVAYNYFNNAYSLDPSNFEYRDALDKMSRNNSSYRKPYYSERRSDPDMCKICGT
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHH
LYCIDCCCECCGGDFISCC
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNPYEILGINKNASKEEIQQAYRKLAKKYHPDQYGNNPLRDLAEQKMREINEAYDYLMKN
CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NNSQSYNSNNYNGSYNNHSSNDYASIRADIDRGNISSAEQKLNSINVRNAEWYYLMGRVN
CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEEEE
YSKGWYDVAYNYFNNAYSLDPSNFEYRDALDKMSRNNSSYRKPYYSERRSDPDMCKICGT
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHH
LYCIDCCCECCGGDFISCC
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA