Click here to switch to the map view.

The map label for this gene is pspE [C]

Identifier: 226947408

GI number: 226947408

Start: 221215

End: 221565

Strand: Reverse

Name: pspE [C]

Synonym: CLM_0235

Alternate gene names: 226947408

Gene position: 221565-221215 (Counterclockwise)

Preceding gene: 226947409

Following gene: 226947407

Centisome position: 5.33

GC content: 25.07

Gene sequence:

>351_bases
TTGACAAGCATTCTATTAATACCTATATACAGTGCTAAAGCTTACAAAAATATTTCTCCAGAAGAAATAAAGCATATAAT
ATCAACACCCTATTCTACTGCTATAATAATAGATGTTAGAACCCCTAAAGAATTTAGTAATGGTCATATACCTAAAAGCT
TAAATATTCCACTTGATAAATTTAAAGATACAATGTTATCTAAAAATATAGATAAAAACACTAAAATAATTATTTATAGC
AATACTAGTGTAAGGGCTAAAAACGCATCAAATTTATTAAATTCATTAGGATTTAATAATGTATATGTTCTAGACCATTT
AAACTCATGGTCCTATCCTTTAGAATATTAA

Upstream 100 bases:

>100_bases
TTACTTGTGCAAAATATATATATAACTTTTAAGTGAGGTGTATAAATTGAATTCTAGAATTAGAGAGAAATTTTTGTTTT
ACTCCTTATTTGTAGTATTA

Downstream 100 bases:

>100_bases
TAAAAATATATATTTAGTAGTCTCTTGACAATATATATATCATAATATACAATTGAGTATAAACTAATATTAAAGGCTTT
GAACAGGAGTAGTAATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Rhodanese Domain-Containing Protein

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTSILLIPIYSAKAYKNISPEEIKHIISTPYSTAIIIDVRTPKEFSNGHIPKSLNIPLDKFKDTMLSKNIDKNTKIIIYS
NTSVRAKNASNLLNSLGFNNVYVLDHLNSWSYPLEY

Sequences:

>Translated_116_residues
MTSILLIPIYSAKAYKNISPEEIKHIISTPYSTAIIIDVRTPKEFSNGHIPKSLNIPLDKFKDTMLSKNIDKNTKIIIYS
NTSVRAKNASNLLNSLGFNNVYVLDHLNSWSYPLEY
>Mature_115_residues
TSILLIPIYSAKAYKNISPEEIKHIISTPYSTAIIIDVRTPKEFSNGHIPKSLNIPLDKFKDTMLSKNIDKNTKIIIYSN
TSVRAKNASNLLNSLGFNNVYVLDHLNSWSYPLEY

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13173; Mature: 13042

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSILLIPIYSAKAYKNISPEEIKHIISTPYSTAIIIDVRTPKEFSNGHIPKSLNIPLDK
CCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHH
FKDTMLSKNIDKNTKIIIYSNTSVRAKNASNLLNSLGFNNVYVLDHLNSWSYPLEY
HHHHHHHCCCCCCCEEEEECCCCEEECCHHHHHHHCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TSILLIPIYSAKAYKNISPEEIKHIISTPYSTAIIIDVRTPKEFSNGHIPKSLNIPLDK
CEEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHH
FKDTMLSKNIDKNTKIIIYSNTSVRAKNASNLLNSLGFNNVYVLDHLNSWSYPLEY
HHHHHHHCCCCCCCEEEEECCCCEEECCHHHHHHHCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA