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The map label for this gene is norM [H]

Identifier: 226947297

GI number: 226947297

Start: 96369

End: 97706

Strand: Reverse

Name: norM [H]

Synonym: CLM_0116

Alternate gene names: 226947297

Gene position: 97706-96369 (Counterclockwise)

Preceding gene: 226947314

Following gene: 226947294

Centisome position: 2.35

GC content: 28.48

Gene sequence:

>1338_bases
TTGAAAATTAATAAAGAAAATATGAAAACTGTACTTTCTTTAGCTCTTCCTGCTGTCGGAGAAATGATTTTATATATGAT
GATCTGGGTTCTTGATACTATGATGGTTGGACAATACGGTGGCCAAATTGCTGTAAGCACTGTAGGATTAAGTTCTGAAA
TAATATATACTTTTACAAATATATTTATAGCTGTTGGACTATCTATTGGTATAACATCTATAGTAGCTAGATCCTATGGT
AGTGATAATTTACATTTAGCTGAGGAGTATGCTTCTATAGGATTATCTATAGGAATTTTAATAGCCTTTTTTATTTCTAT
TATACTATTTATTTTTCCTAAAACTATACTTAGCCTTGCTAATGCTAAAGAAGCTGTATTAATAAACGGAACAATATATA
TTAAAATAATTTCTCTTGGAATATTCTTTAGTATGTTAACTAGCTTAATGAATTCTATAGTTAGAGGATATGGTAATACC
AAGACTCCTTTATTTATCTCCATATTAATCAACATAGTAAATTTAACTTTAGATTATGGACTTATATTTGGTAAATTAGG
ACTTCCGGAGTTAGGAATAAGGGGTGCTGCTATCGCAACTTCTATAGCTAACCTATCTGGTTTTATGTTTGCCATATACT
ATTTATTTACTAAATCTAAAATTAAACCTAAAATAAAATATATTAAAAATATTAATATAAGTCGTTTGAAATACTTAATA
AGATTGTCTATCCCATCATCACTGCAAGAAGCTTCATTAAGTGTAAGTAAATTAATTAATACATTTATGATAATGCATTT
AGGAACTGTAGCTTTTGCCTCTAATCAGATAGCTCTTACTGTAGAATCAATATCTTTTATGCCTGGTTGGGGTTTTGCCG
TAGCAGCTACTACACTAACAGGTCATAAAATAGGAGAAAAAGATATTGAAAAAGCTAGAGATTATTCACATACTTGCGCA
TTTTTAGGAATTTGTATAATGGGAATAACAGGTCTTATTTTTCTTATATTCCCATCATTCATAATAAAATTATTTATAAC
AAATTCTGAAAAACAAGTTATCACCTTAGGTAGCCGTTGCCTTATGATCGCTTCTTTAGAACAAATTCCTATGGCTATAT
CTATGATATTAGGAGGATCATTAAAAGGATTTGGCGATACTAAAACACCATTTTTAGTTTCCTTTATATCCAGTTGGCTT
CTTAGACTTCCTTTAATGTTCTATTTTATATATATAGTTAAATCTTCTGTAACTTATGTTTGGTGGATAACTTCTATTCA
ATGGATATTTGAAGCTATATGCTTAATAATACTTTCTAGGAAAAAATTTAATAAATAA

Upstream 100 bases:

>100_bases
TTAATTTTACCATATAAACATATCTTTATTAACTATATTGCTTTATTTAATGCTATAAGTTACTATTAAATTGCTAGTAT
TTTGGAGTGGGGGAATTTTA

Downstream 100 bases:

>100_bases
AATATTAACCTATAATAATGCTATAGGCAACCAAATAGTCTACGGCCTAAAATAGGATGTCTCAAAATAGCCTTAATTTT
AAAACCGTAAATATAAATAA

Product: MATE efflux family protein

Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]

Alternate protein names: Multidrug-efflux transporter [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKINKENMKTVLSLALPAVGEMILYMMIWVLDTMMVGQYGGQIAVSTVGLSSEIIYTFTNIFIAVGLSIGITSIVARSYG
SDNLHLAEEYASIGLSIGILIAFFISIILFIFPKTILSLANAKEAVLINGTIYIKIISLGIFFSMLTSLMNSIVRGYGNT
KTPLFISILINIVNLTLDYGLIFGKLGLPELGIRGAAIATSIANLSGFMFAIYYLFTKSKIKPKIKYIKNINISRLKYLI
RLSIPSSLQEASLSVSKLINTFMIMHLGTVAFASNQIALTVESISFMPGWGFAVAATTLTGHKIGEKDIEKARDYSHTCA
FLGICIMGITGLIFLIFPSFIIKLFITNSEKQVITLGSRCLMIASLEQIPMAISMILGGSLKGFGDTKTPFLVSFISSWL
LRLPLMFYFIYIVKSSVTYVWWITSIQWIFEAICLIILSRKKFNK

Sequences:

>Translated_445_residues
MKINKENMKTVLSLALPAVGEMILYMMIWVLDTMMVGQYGGQIAVSTVGLSSEIIYTFTNIFIAVGLSIGITSIVARSYG
SDNLHLAEEYASIGLSIGILIAFFISIILFIFPKTILSLANAKEAVLINGTIYIKIISLGIFFSMLTSLMNSIVRGYGNT
KTPLFISILINIVNLTLDYGLIFGKLGLPELGIRGAAIATSIANLSGFMFAIYYLFTKSKIKPKIKYIKNINISRLKYLI
RLSIPSSLQEASLSVSKLINTFMIMHLGTVAFASNQIALTVESISFMPGWGFAVAATTLTGHKIGEKDIEKARDYSHTCA
FLGICIMGITGLIFLIFPSFIIKLFITNSEKQVITLGSRCLMIASLEQIPMAISMILGGSLKGFGDTKTPFLVSFISSWL
LRLPLMFYFIYIVKSSVTYVWWITSIQWIFEAICLIILSRKKFNK
>Mature_445_residues
MKINKENMKTVLSLALPAVGEMILYMMIWVLDTMMVGQYGGQIAVSTVGLSSEIIYTFTNIFIAVGLSIGITSIVARSYG
SDNLHLAEEYASIGLSIGILIAFFISIILFIFPKTILSLANAKEAVLINGTIYIKIISLGIFFSMLTSLMNSIVRGYGNT
KTPLFISILINIVNLTLDYGLIFGKLGLPELGIRGAAIATSIANLSGFMFAIYYLFTKSKIKPKIKYIKNINISRLKYLI
RLSIPSSLQEASLSVSKLINTFMIMHLGTVAFASNQIALTVESISFMPGWGFAVAATTLTGHKIGEKDIEKARDYSHTCA
FLGICIMGITGLIFLIFPSFIIKLFITNSEKQVITLGSRCLMIASLEQIPMAISMILGGSLKGFGDTKTPFLVSFISSWL
LRLPLMFYFIYIVKSSVTYVWWITSIQWIFEAICLIILSRKKFNK

Specific function: Multidrug efflux pump [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Homo sapiens, GI22907060, Length=438, Percent_Identity=23.2876712328767, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI48994890, Length=402, Percent_Identity=24.3781094527363, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI226510954, Length=432, Percent_Identity=24.0740740740741, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 49157; Mature: 49157

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKENMKTVLSLALPAVGEMILYMMIWVLDTMMVGQYGGQIAVSTVGLSSEIIYTFTN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHH
IFIAVGLSIGITSIVARSYGSDNLHLAEEYASIGLSIGILIAFFISIILFIFPKTILSLA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKEAVLINGTIYIKIISLGIFFSMLTSLMNSIVRGYGNTKTPLFISILINIVNLTLDYG
CCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LIFGKLGLPELGIRGAAIATSIANLSGFMFAIYYLFTKSKIKPKIKYIKNINISRLKYLI
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
RLSIPSSLQEASLSVSKLINTFMIMHLGTVAFASNQIALTVESISFMPGWGFAVAATTLT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHC
GHKIGEKDIEKARDYSHTCAFLGICIMGITGLIFLIFPSFIIKLFITNSEKQVITLGSRC
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHH
LMIASLEQIPMAISMILGGSLKGFGDTKTPFLVSFISSWLLRLPLMFYFIYIVKSSVTYV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
WWITSIQWIFEAICLIILSRKKFNK
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKINKENMKTVLSLALPAVGEMILYMMIWVLDTMMVGQYGGQIAVSTVGLSSEIIYTFTN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHH
IFIAVGLSIGITSIVARSYGSDNLHLAEEYASIGLSIGILIAFFISIILFIFPKTILSLA
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NAKEAVLINGTIYIKIISLGIFFSMLTSLMNSIVRGYGNTKTPLFISILINIVNLTLDYG
CCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LIFGKLGLPELGIRGAAIATSIANLSGFMFAIYYLFTKSKIKPKIKYIKNINISRLKYLI
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
RLSIPSSLQEASLSVSKLINTFMIMHLGTVAFASNQIALTVESISFMPGWGFAVAATTLT
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHC
GHKIGEKDIEKARDYSHTCAFLGICIMGITGLIFLIFPSFIIKLFITNSEKQVITLGSRC
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHH
LMIASLEQIPMAISMILGGSLKGFGDTKTPFLVSFISSWLLRLPLMFYFIYIVKSSVTYV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
WWITSIQWIFEAICLIILSRKKFNK
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]