| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is yaaT [H]
Identifier: 226947283
GI number: 226947283
Start: 84497
End: 85411
Strand: Direct
Name: yaaT [H]
Synonym: CLM_0100
Alternate gene names: 226947283
Gene position: 84497-85411 (Clockwise)
Preceding gene: 226947282
Following gene: 226947284
Centisome position: 2.03
GC content: 29.95
Gene sequence:
>915_bases ATGATAGAAGTTGTGGGAGTCCGATTTAAAAAGGCAGGTAAAATATATTATTTTGATCCTAGTAATATAGAAATAAATAA GGGAGAATATGTTATAGTAGAAACTATAAGAGGAATAGAATTTGGAGAAGCGGTTATTGCTAAAAAGCAAATTAATGAAA GTGAAATAGTAGCACCATTAAAAAATGTAATTAGAAAAGCGACGGAAGAAGATATAAAAAAACATCATGAAAACAAGGAA AAAGAAAAATACGCATTAGAAACTTGTCTACAAAAGATACAGGAACATAAATTAAATATGAAGCTAATAGATGTAGAATA CACTTTTGATAATAACAAAGTTATATTCTATTTTACAGCAGACGGTAGAGTGGATTTTAGAGAATTAGTTAAAGATTTAG CTTCGATATTTAGGACTAGAATAGAATTAAGACAAATAGGAGTACGTGATGAAGCAAAAATGGTTGGAGGATTAGGACCT TGTGGGAGACCTATGTGTTGTTCTATATTTTTAGGAGATTTTGCTCCAGTATCAATAAAGATGGCTAAGGAACAAAATTT ATCATTAAATCCTACCAAAATTTCAGGCATATGTGGAAGACTTATGTGTTGTTTAAACTATGAGCAGCAAACTTATGAAA GTATTAGAAAAGTATTACCTAAGATAGGATCAATAGTTAAAACTCCTTATGGACAAGGAGAAGTAGTGGATAATAATGTA GTGAAAGAAGAAGTTAAAGTCAAGATTAAAAGTGAAGATAACGAAGAATTTATACAGCCAGTGCCTATAATAGAAGCAGA ACTTATATCTGGTGGTTATGAGGGAAATATAGAAAGTGTAGATGAAGAAGAAATAAATATTGAAATAGACGATGCAGATG AAACAATAATAAAAGAGTTGCTTAAAGATGAATAG
Upstream 100 bases:
>100_bases ATGGTAAGTATAATAAATGATACAAGAGATAAATTAAGTAAAAATATAAACTCCACTCTAGTATTTGATGCAATGCTTAT AAAAATGCAGGAGGTATAAT
Downstream 100 bases:
>100_bases GAGGAAGATTTATGAAGGCACTATTAAAAGTATGCGATATGAGAACAATACAGGATATAAATAAAGTAAAAAGTGCTGTA GCTAATAATGAAGGTGTAGT
Product: PSP1 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MIEVVGVRFKKAGKIYYFDPSNIEINKGEYVIVETIRGIEFGEAVIAKKQINESEIVAPLKNVIRKATEEDIKKHHENKE KEKYALETCLQKIQEHKLNMKLIDVEYTFDNNKVIFYFTADGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGP CGRPMCCSIFLGDFAPVSIKMAKEQNLSLNPTKISGICGRLMCCLNYEQQTYESIRKVLPKIGSIVKTPYGQGEVVDNNV VKEEVKVKIKSEDNEEFIQPVPIIEAELISGGYEGNIESVDEEEINIEIDDADETIIKELLKDE
Sequences:
>Translated_304_residues MIEVVGVRFKKAGKIYYFDPSNIEINKGEYVIVETIRGIEFGEAVIAKKQINESEIVAPLKNVIRKATEEDIKKHHENKE KEKYALETCLQKIQEHKLNMKLIDVEYTFDNNKVIFYFTADGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGP CGRPMCCSIFLGDFAPVSIKMAKEQNLSLNPTKISGICGRLMCCLNYEQQTYESIRKVLPKIGSIVKTPYGQGEVVDNNV VKEEVKVKIKSEDNEEFIQPVPIIEAELISGGYEGNIESVDEEEINIEIDDADETIIKELLKDE >Mature_304_residues MIEVVGVRFKKAGKIYYFDPSNIEINKGEYVIVETIRGIEFGEAVIAKKQINESEIVAPLKNVIRKATEEDIKKHHENKE KEKYALETCLQKIQEHKLNMKLIDVEYTFDNNKVIFYFTADGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGP CGRPMCCSIFLGDFAPVSIKMAKEQNLSLNPTKISGICGRLMCCLNYEQQTYESIRKVLPKIGSIVKTPYGQGEVVDNNV VKEEVKVKIKSEDNEEFIQPVPIIEAELISGGYEGNIESVDEEEINIEIDDADETIIKELLKDE
Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]
COG id: COG1774
COG function: function code S; Uncharacterized homolog of PSP1
Gene ontology:
Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PSP1 C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007557 [H]
Pfam domain/function: PF04468 PSP1 [H]
EC number: NA
Molecular weight: Translated: 34574; Mature: 34574
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVVGVRFKKAGKIYYFDPSNIEINKGEYVIVETIRGIEFGEAVIAKKQINESEIVAPL CEEEEEEEEECCCEEEEECCCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHH KNVIRKATEEDIKKHHENKEKEKYALETCLQKIQEHKLNMKLIDVEYTFDNNKVIFYFTA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEC DGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGPCGRPMCCSIFLGDFAPVSIK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHEECCCCCCEEEE MAKEQNLSLNPTKISGICGRLMCCLNYEQQTYESIRKVLPKIGSIVKTPYGQGEVVDNNV EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHH VKEEVKVKIKSEDNEEFIQPVPIIEAELISGGYEGNIESVDEEEINIEIDDADETIIKEL HHEEHEEEEECCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH LKDE HCCC >Mature Secondary Structure MIEVVGVRFKKAGKIYYFDPSNIEINKGEYVIVETIRGIEFGEAVIAKKQINESEIVAPL CEEEEEEEEECCCEEEEECCCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHH KNVIRKATEEDIKKHHENKEKEKYALETCLQKIQEHKLNMKLIDVEYTFDNNKVIFYFTA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEEEC DGRVDFRELVKDLASIFRTRIELRQIGVRDEAKMVGGLGPCGRPMCCSIFLGDFAPVSIK CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHEECCCCCCEEEE MAKEQNLSLNPTKISGICGRLMCCLNYEQQTYESIRKVLPKIGSIVKTPYGQGEVVDNNV EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHH VKEEVKVKIKSEDNEEFIQPVPIIEAELISGGYEGNIESVDEEEINIEIDDADETIIKEL HHEEHEEEEECCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH LKDE HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]