| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is bofA
Identifier: 226947248
GI number: 226947248
Start: 35639
End: 35899
Strand: Direct
Name: bofA
Synonym: CLM_0041
Alternate gene names: NA
Gene position: 35639-35899 (Clockwise)
Preceding gene: 226947247
Following gene: 226947249
Centisome position: 0.86
GC content: 23.75
Gene sequence:
>261_bases ATGGGAATAGAATATATTGCTTATTTTATTTTAGCTATATTTTTGTTGTTTGTAGTAGTAAAAATATTTTCATGGCCATT AAAAATCCTCTTAAGTTTAATAGGAAATGCCATTTTAGGAACAGTATTGTTATTTATTTTAAATGTGATTGGAGGAGCTT TTAATTTTTACATAGGTATAAATATATGGACAGCATTAATAGCAGGATTCTTTGGAATACCAGGAGTTATATTTCTTATA ATATTTAAATTATTTTTATAG
Upstream 100 bases:
>100_bases TTTTATTATTTTTTACTTAATATAATATTAAAACAATATATAATTTTTAGTGTTAGTATAGAATATAAATATAATATATA GATTAGGGGGTGTTGAATTT
Downstream 100 bases:
>100_bases GTATGTGGATAACTTTAAAAATAATAAATGTTTTCAACAATCCACAGGTTAATATGTGGATAAAAACTGTGGATATGTGT ATAATTATATTTGAATTTAT
Product: sigma-K factor processing regulatory protein BofA
Products: NA
Alternate protein names: Pro-SigmaK Processing Inhibitor BofA; SigmaK-Factor Processing Regulatory Protein; Sigma-K Factor-Processing Regulatory Protein BofA; Sigma-K Factor Processing Regulatory Protein BofA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MGIEYIAYFILAIFLLFVVVKIFSWPLKILLSLIGNAILGTVLLFILNVIGGAFNFYIGINIWTALIAGFFGIPGVIFLI IFKLFL
Sequences:
>Translated_86_residues MGIEYIAYFILAIFLLFVVVKIFSWPLKILLSLIGNAILGTVLLFILNVIGGAFNFYIGINIWTALIAGFFGIPGVIFLI IFKLFL >Mature_85_residues GIEYIAYFILAIFLLFVVVKIFSWPLKILLSLIGNAILGTVLLFILNVIGGAFNFYIGINIWTALIAGFFGIPGVIFLII FKLFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9587; Mature: 9456
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEYIAYFILAIFLLFVVVKIFSWPLKILLSLIGNAILGTVLLFILNVIGGAFNFYIGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIWTALIAGFFGIPGVIFLIIFKLFL HHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GIEYIAYFILAIFLLFVVVKIFSWPLKILLSLIGNAILGTVLLFILNVIGGAFNFYIGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIWTALIAGFFGIPGVIFLIIFKLFL HHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA