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The map label for this gene is ybaB [C]

Identifier: 226947245

GI number: 226947245

Start: 34199

End: 34540

Strand: Direct

Name: ybaB [C]

Synonym: CLM_0038

Alternate gene names: 226947245

Gene position: 34199-34540 (Clockwise)

Preceding gene: 226947244

Following gene: 226947246

Centisome position: 0.82

GC content: 36.26

Gene sequence:

>342_bases
ATGGCAAGAGGTGGATTCCCTAACATGGGTGGAGCAAATATGAATAACTTAATGAAACAGGCTCAAAAGCTTCAACAAGA
TATGGAAAAAATGCAGGGAGAAATGGAAAAGAAAGAATTTTCAGCTACAGTTGGAGGAGGAGCAGTTACAGCTGTTGCTA
ATGGGAAAAAACAAATAGTAGATATAAAAATTGAACCAGAAGTTGTAGATGAAGATGACATAGAAATGCTTGAAGATTTA
ATAATGAGTGCATGCAACGAAGCTTTAAAGAAAGCTGAAGAAGACACTTCAAGCGAAGTGAAAAGATTAACTGGAGGAAT
GAACTTACCAGGAATGTTCTAA

Upstream 100 bases:

>100_bases
TTTGGAGAGAATATACTAGAAATAATTGATGAATAGCTAGTTAAATATTACAATTATGATATAATAAAAATCTAATTATT
TATATTAAGGAGGAATTTTT

Downstream 100 bases:

>100_bases
ATTTAAGCTAAAGTAAAACAGAGGTGAAAGATTTGGATTTTTATCCTATAGCTATAGAAAAATTAATAGAAGAGTTCGCT
AAATTACCGGGTATAGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MARGGFPNMGGANMNNLMKQAQKLQQDMEKMQGEMEKKEFSATVGGGAVTAVANGKKQIVDIKIEPEVVDEDDIEMLEDL
IMSACNEALKKAEEDTSSEVKRLTGGMNLPGMF

Sequences:

>Translated_113_residues
MARGGFPNMGGANMNNLMKQAQKLQQDMEKMQGEMEKKEFSATVGGGAVTAVANGKKQIVDIKIEPEVVDEDDIEMLEDL
IMSACNEALKKAEEDTSSEVKRLTGGMNLPGMF
>Mature_112_residues
ARGGFPNMGGANMNNLMKQAQKLQQDMEKMQGEMEKKEFSATVGGGAVTAVANGKKQIVDIKIEPEVVDEDDIEMLEDLI
MSACNEALKKAEEDTSSEVKRLTGGMNLPGMF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=105, Percent_Identity=39.0476190476191, Blast_Score=75, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y032_CLOBH (A5HXS7)

Other databases:

- EMBL:   CP000727
- EMBL:   AM412317
- RefSeq:   YP_001252580.1
- RefSeq:   YP_001385991.1
- ProteinModelPortal:   A5HXS7
- SMR:   A5HXS7
- STRING:   A5HXS7
- GeneID:   5187213
- GeneID:   5400028
- GenomeReviews:   AM412317_GR
- GenomeReviews:   CP000727_GR
- KEGG:   cbh:CLC_0052
- KEGG:   cbo:CBO0032
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- BioCyc:   CBOT36826:CBO0032-MONOMER
- BioCyc:   CBOT441771:CLC_0052-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12271; Mature: 12140

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
9.7 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
8.9 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGGFPNMGGANMNNLMKQAQKLQQDMEKMQGEMEKKEFSATVGGGAVTAVANGKKQIV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
DIKIEPEVVDEDDIEMLEDLIMSACNEALKKAEEDTSSEVKRLTGGMNLPGMF
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ARGGFPNMGGANMNNLMKQAQKLQQDMEKMQGEMEKKEFSATVGGGAVTAVANGKKQIV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEE
DIKIEPEVVDEDDIEMLEDLIMSACNEALKKAEEDTSSEVKRLTGGMNLPGMF
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA