Definition Laribacter hongkongensis HLHK9, complete genome.
Accession NC_012559
Length 3,169,329

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 226940857

GI number:

Start: 1842529

End: 1844760

Strand: Reverse

Name: Not Available

Synonym: LHK_01938

Alternate gene names: NA

Gene position: NA

Preceding gene: 226940862

Following gene: 226940856

Centisome position: NA

GC content: NA

Gene sequence:

>2232_bases
ATGTCCTTGAAAAAACTGTTTAGTATGGCTCTGTGCAGTCTGGCCTGCGTGTTGCCGCTGGTGACCCAGGCCGCATCCGC
CAATGCCGAGCGCCCGCGCATCGGTCTGGTACTGGGGGGCGGCGGCGCGCGAGGCTTTGCCCACCTGGGGGTGCTGGAGG
AGCTGGAACGCCTGCGCATCCCGATCGACTGTCTGGCTGGTGCTTCGGCCGGTGCGCTGATCGGTGGTTTCTATGCTGCC
GGGCGGCCGGTGGCCGAATTGCAGCAGCAGTTTGCTGATGCCGACTGGGATGCCATGCTGGCCGGGCGGGCTGCCCGCTC
CAACGTGCCGTTTACCGTCAAGCGCGACGATTTCCTCAACTATTTCGATTTTGCCGTCGGCGTGCGCGATGGCAGTTTGC
AACTGCCGCGAGGTGCGATCAATTCACAGGAAATCGACCTCTTCATCCGTGATCTGGCGCGCAACGTACACCGGGACAGC
TTTGATGCCCTGCCGATCCCGTTTCAGGCCATGGCGACAGACCTGACCACCGGCGAGCCGGTGACCTTCCGTAGCGGAGA
CCTGGCCACGGCCTTGCGAGCCAGCATGGCGGTGCCGGGCCTGTTTGATCCGGTGCCCTACGGCGACAGCCTGCTGGTCG
ATGGTGGCCTGGCCCGCCAGCTGCCGATCCAGAACCTGAAAAACCAGTGTGCCGACATCCTGATCGTGGTGGATGTCGGT
ACGCCGTCGCTCAAGCCGGGCGCCATCCGCTCGGTGCTTGACGTGGTAGCGCAGGCCACCAACATCGGCGTGCAGCAGAA
CGTACGCCAGCAAATGCGCTATCTCGACAAGCGGGATATTTTCATCCGGCCGGATCTGGGTAACTACACCAGCGCCAGCT
TCAGTGCCAGCCCGCAGCTGGCCGAGCTGGGGCGGAAGGCCATTCGCCAGCATGCCGAAGCCCTGTCGGCGTTGTCGCTG
GACGAAGATGACTACCGGGCATGGCAACAGAGGCACCAGCAGGTCGAGGAACGCCAGCCGGAAGTCAGCCGGATTACGGT
CGCCGAAACCCGCTACGTATCGCCCGAGGCGCTGCGTCAGCCACTGGAGCGGCTGGAAGGCCAGCCACTGGATACCGGAG
AGCTGCACCGGACACTGCGCGAAGCCTATGCCAGCGGCGATTACGAGCGCTTGAATTACGGCTTGAGGGATGAGGCAGAC
GGCCGGGTGGCCATTGACGTACAGGCCGAGGATCGCTCCATCGCGCCCAACTATCTACGGTTCGGGATGACGTTTGCCTC
GGAAACCAGCGGGGAATCCACCTTTAACCTGAATTTCGGCTACACCCGGCGCTGGCTGAATGCCGCCGGAGCCGAGTGGC
GCAATGTAGTCCGCTTTGGGCAGAAGGATGCCTTCGGTACCGAGTGGTACCAGCCGCTGTCGGTCGGCAACCCGTGGTTT
GGTTACGCCGCTGCCGGTTACAGCCAGCGCCCCTTTACCCTGTTCAACCGGGAGGGTGAACAGATTGCCCGTTTTGACAT
CAGCTCTCCGCGGCTGTCGGTCGGTGGCGGCCGGTCGCTGGGCAATTACGGTGAGGTCCGTGTTGGGCTGACGCACGGGC
ATGATGAAACCAGGCTGAGTCTTGGTGATCCGGGTGTATTCGGACGTGAAGGCCGGCGTAATCCGGTCGGCGGGATCGAG
GCTTCACTGGTGGTCGACCAGTTCGACAGTCCCAGACTGCCGCGCAGCGGATATCTGGCGACGCTGCATGCTTACCAGGG
CATCCGGGGGCTGGGGGATGACGATGAAACCCGGCGCTTGCTGATGAGTCTGGACAAGGCGTATCCCTTTGATGCCAATA
CTGTATTGCGTGTGACCTTCAAGGGCTCGGCACTGTTGCAGTCTGACAGCCTGCAAGTGGACGAGTTTTCGACCCTGGGC
GGATTCCTGAACCTGTCGGGTTACAAGGCTGACCAGCTGGTTGGCGAAAAGGTTGCGCTGGTACGGCTGATGGGATACCG
GCGGGTGGCCAGCCTGCCTTCGGCGCTGGGCAGCGGCCTGTATCTGGGCGGCTCGCTGGAGGCGGGGCGGGTCTGGGGTG
TGCCGGACGGTTACGCGCAAAAAACCGGCTGGATTCCGGCAGGTTCGCTGTTTGCGGCAGCCGACAGTCTGCTGGGGCCG
CTGTTTCTGGGTGTGGGCTATGCGGAGGGCGGCAAACTGACGGCTTATCTGACTTTGGGCATGGATTACTGA

Upstream 100 bases:

>100_bases
ACGCGGCAACTGCAACAGCCGGGGCTTTTCGGGTTGCAAATGCACGGCGGCAACAGGTGCCCCTCTATAATGGCGTCGTT
ATTGCCGGATGCGATGCCCA

Downstream 100 bases:

>100_bases
ACCGGCTCACGTAAGATGGGCAGGCAACTGCGTCAGGTATTGAAAGGCTGGTCATGAATCCGTCAATTTGCCTCTTTTCC
TATGTGTGCCCGATTCCGGT

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>743_residues
MSLKKLFSMALCSLACVLPLVTQAASANAERPRIGLVLGGGGARGFAHLGVLEELERLRIPIDCLAGASAGALIGGFYAA
GRPVAELQQQFADADWDAMLAGRAARSNVPFTVKRDDFLNYFDFAVGVRDGSLQLPRGAINSQEIDLFIRDLARNVHRDS
FDALPIPFQAMATDLTTGEPVTFRSGDLATALRASMAVPGLFDPVPYGDSLLVDGGLARQLPIQNLKNQCADILIVVDVG
TPSLKPGAIRSVLDVVAQATNIGVQQNVRQQMRYLDKRDIFIRPDLGNYTSASFSASPQLAELGRKAIRQHAEALSALSL
DEDDYRAWQQRHQQVEERQPEVSRITVAETRYVSPEALRQPLERLEGQPLDTGELHRTLREAYASGDYERLNYGLRDEAD
GRVAIDVQAEDRSIAPNYLRFGMTFASETSGESTFNLNFGYTRRWLNAAGAEWRNVVRFGQKDAFGTEWYQPLSVGNPWF
GYAAAGYSQRPFTLFNREGEQIARFDISSPRLSVGGGRSLGNYGEVRVGLTHGHDETRLSLGDPGVFGREGRRNPVGGIE
ASLVVDQFDSPRLPRSGYLATLHAYQGIRGLGDDDETRRLLMSLDKAYPFDANTVLRVTFKGSALLQSDSLQVDEFSTLG
GFLNLSGYKADQLVGEKVALVRLMGYRRVASLPSALGSGLYLGGSLEAGRVWGVPDGYAQKTGWIPAGSLFAAADSLLGP
LFLGVGYAEGGKLTAYLTLGMDY

Sequences:
NA

Specific function: NA

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA