Definition Laribacter hongkongensis HLHK9, complete genome.
Accession NC_012559
Length 3,169,329

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Identifier: 226940605

GI number:

Start: 1611361

End: 1612785

Strand: Reverse

Name: Not Available

Synonym: LHK_01685

Alternate gene names: NA

Gene position: NA

Preceding gene: 226940606

Following gene: 226940593

Centisome position: NA

GC content: NA

Gene sequence:

>1425_bases
ATGGCAACCATATCTAAGTACCGGAAAAAGAACGGAGAATTGTCGTATCAGGCGACAGTCCGGGTCAAGCAAGCTGGCCG
GGTGGTTTTCTCCGCGACGCGCTCATTTCCGAAAGAATCCCTGGCTCGTGACTGGGCCAGACGCACGGAAGTCGAGGCTG
CATCCCCAGACTTCATCACCAGGCATGCGCTCGGGAAAATGACCTTTGGCGACCTGCTGGTACGGTACCGGGATGAGCTC
TCCGGATCAGGCAAGATCGGCCGCTCGAAACGGTACGTGATCGACCTGCTGCTCAGATCCTCGATTTCAGAGCGCCCCAT
ATCCGAGCTGTCCGCCCAGGACCTGGTCGAGCACTGCAAGATCCGGCGTGACGCAGGAACAGGCCCGGTAACCGTCTTCC
AGGACGTCTCCGCCATGCGGACCGTACTCGACTACGCAAAGCGTATCTGGTCCCTGCCGGTCTCGACCCAGCCTGTCGAT
GATGCCCTGCCCGTCCTGCGCGCCCAGACACTTGTCAGCAAGAGCCGCCAGCGTGACCGGCGACCTGCTGACGAGGAGCT
CGAGCAGATTTATGCCGGGCTGGCTGCCCGGCAATCGCGCTCAAACGCCCAGATACCGCACGTCGACATCATCAAGTTCG
CCATTGCCAGCTGCATGCGGCTGGGGGAAATCGGGCGTATCCGTTGGGATGACATTGATGAAAAGCGGCGCTGTGTCTTG
ATCCGCGAGCGCAAGGACCCGTCAAACAAGTACACAAACGACCAGTGGATACCCCTGCTGGGAGAGGCGTGGGACATTGT
GCAGCGGCAGCCGCGTACTGACGAACTGATTTTCCCGTACAAAATGGAATCGGTCAGTGCGGCCTTTGAGCGTACATGTG
CGGTGCTGGGGATTGTTGACCTGCGCTTTCACGACCTGCGGCACCACGGCGTTTCGCTCCTGTTCGAGCAGGGACTGAAA
ATCCAGGAGGTGGCCATGGTTTCCGGTCACAAGAGCTGGAACAACCTGCGGCGCTATACCCAGCTGCGACCCGAGTCCCT
GCATGACAAGATTGCCGCGTCGGCCCCCGCGCCCCGTTCTTCCGCGCTGACCGTTTCGGTATCTGGCGGGGTCTACATGG
GCGGCTGGTCGAACGCTGACGATGTGCTCCGGGCATTCGAGCTGGAGCCGGAAGACCTGGCCGAGTCGTGCATTCTGCTG
GCTGGAGAATTCGGGCCAGGGGGGGCGGTCGTCGCGTTTACCGACGTCGGAGACCTGTGGTGGGTGTATTGCACCGGCAG
CGATCGCGTGTGGCTGCCGGAAAGAATTGTCGCCAACCGGCTGCGGCACCGGCTGGCGACTGGTCGGGTCGGGGCGAGGC
CAGATGGCAGCAACCTGTTCGGCAAACAATTGCTTGAGGTACTGGCGTCTGCATCTGCCTCATGA

Upstream 100 bases:

>100_bases
TTTGATCGTATTTTACGGCGTTTTCATGGTGTCAGTGCAGAAAACGGTGCAGAATGCGGGCTGTTCTGCACCGCTTTTTC
TGACTTTTCTGCACCGGCCT

Downstream 100 bases:

>100_bases
CACCTGGCTCTTTGACCACTGCTTTCTCGCTGCCTCGCGCTGCGTGTCCAGCCAGTCCGCGAGGTCTGACAGATGCACCA
TACGGGGCGACTTCTGGCTG

Product: Site-specific recombinase, phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>474_residues
MATISKYRKKNGELSYQATVRVKQAGRVVFSATRSFPKESLARDWARRTEVEAASPDFITRHALGKMTFGDLLVRYRDEL
SGSGKIGRSKRYVIDLLLRSSISERPISELSAQDLVEHCKIRRDAGTGPVTVFQDVSAMRTVLDYAKRIWSLPVSTQPVD
DALPVLRAQTLVSKSRQRDRRPADEELEQIYAGLAARQSRSNAQIPHVDIIKFAIASCMRLGEIGRIRWDDIDEKRRCVL
IRERKDPSNKYTNDQWIPLLGEAWDIVQRQPRTDELIFPYKMESVSAAFERTCAVLGIVDLRFHDLRHHGVSLLFEQGLK
IQEVAMVSGHKSWNNLRRYTQLRPESLHDKIAASAPAPRSSALTVSVSGGVYMGGWSNADDVLRAFELEPEDLAESCILL
AGEFGPGGAVVAFTDVGDLWWVYCTGSDRVWLPERIVANRLRHRLATGRVGARPDGSNLFGKQLLEVLASASAS

Sequences:
NA

Specific function: NA

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA