Definition Laribacter hongkongensis HLHK9, complete genome.
Accession NC_012559
Length 3,169,329

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Identifier: 226940314

GI number:

Start: 1334340

End: 1337783

Strand: Reverse

Name: Not Available

Synonym: LHK_01389

Alternate gene names: NA

Gene position: NA

Preceding gene: 226940315

Following gene: 226940313

Centisome position: NA

GC content: NA

Gene sequence:

>3444_bases
ATGAATACGCCGCGCTTCATCCATCTCCGTCTCCATAGTGAATTTTCCGTCACCGATGGCATCACCCGCATCGGTGACGC
CGTCAAGCGGGCTGCGCTCGAGCGCATGCCGGCACTCGGCCTGTCCGACCTGATGAACCTCTTCGGCATGGTCAAGTTTT
ACAAGGCCTGCCTTGGCAAGGGCGTCAAGCCCATCGTGGCCGTCGATGCCTGGCTGGAAAACCCGGCCGACCGCGACCAG
CCTTCCCGCTGCCTCCTGATCGCCATGAACACCGCCGGTTACCACAGGCTGAGCGAACTGCTGACCGATGCCTACCGCCT
CAACCAGTACCGTGGCCGGGCCGAACTCCAGCGCGAATGGCTGACCCGTGAAGCCTGCGAAAACCTCATCTTCGTATCCG
GTGCCCAGCATGGCGACACCGGCCAAGCCCTGCTGGCCGGCAACCTGGAACTGGCCCAGGCATTGGCGCGGGACTGGGCC
CAGCGCTTTCCCGGCCGCTGCTATCTGGAAATCCAGCGCACCGGCAAACCCGAAGCCGACACCTGCACCGAACGCATGCT
GTGGCTGGCCGGTGAAACCGGCTTGCCGGTCGTCGCCACGCATCCGGTCCAGTTTCTGGACCGTGACGACTTCATGGCCC
ACGAGGCGCGCGTGTGCATTGCCGAAGGGGAAATGCTCGGCAACCCCAAGCGGGTGCGCCATTACACCGAAGAACAGTAC
TTCAAGAGTACGGACGAAATGGCCGCACTGTTTGCCGACGTGCCCGAGGCACTGGAAAACAGCGTTGAAATCGCCCGCCG
CTGCAATATCGAAATCCTGCTGGGCAAGAACTTCCTGCCCGACTTCCCGACGCCGGACGGCCTGTCGCTGGACGACTACC
TGATCAAGCGTTCCGAAGAAGGTCTGGTCGAGCGCATGCAGGCGCTCTACCCGGATGCCGGGCAGCGCGAAGCCGAAATG
CCGCGCTACCGCGAGCGGCTGAAATTCGAGCTCGACACCATCATCCAGATGGGCTTTCCGGGCTACTTCCTGATCGTGGC
CGACTTCATCAACTGGGCCAAGGCCAACGGCTGCCCGGTCGGGCCGGGCCGCGGCTCGGGCGCCGGCTCGCTGGTGGCAT
TCAGCATCGGCATCACCGACATCAATCCGCTCGACTATGCCCTGCTGTTCGAACGCTTCCTCAACCCCGAACGGGTGTCG
ATGCCTGACTTCGACATCGACTTCTGCCAGGACAACCGCTGGCGGGTGATCGAGTACGTGCGCGAACGCTACGGCGCCGA
CGCCGTCAGCCAGATCGCCACCTTCGGCACCATGGCGGCCAAGGCCGTGGTGCGCGACGTCGGCCGGGTGCTCGACCTGC
CCTACTCCTTCTGCGATGGCCTCTCCAAGCTGATTCCGGCCGCACCGGGCAAGCAGTATTCACTCGACGATGCCGTCGAG
ATGGAGCCCATCCTCAAGGAGCGGCTGGAAAAGGAAGAAGAAGTCTCGCAGCTGTGGGCTCTCGCCAAAAAGCTCGAAGG
ACTGACCCGCAACATCGGCATGCATGCCGGCGGCGTGCTGATCGCCCCGGGCAAGATCACCGACTTCTGCCCGATGTACC
AGGCCAGCGGCGACGACGCTTCGCCGGTGTCCATGCTCGACAAGGGCGACGTGGAGGACGTCGGTCTGGTCAAGTTCGAC
TTTCTGGGCCTGCGCAACCTCACCATCATCGATCTGGCGGTCAACTACATCAAGGCACTGGACCCGGCATTCGACCTTGA
CCTCAACCACATGCCGTTCACCGATCCGGCCGCCTACCGCGTCCTGCAACAGGCCAACACCACCGCGGTGTTCCAGCTGG
AATCGGAGGGCATGAAAAAGCTGCTGGAAAAGCTCAAGCCCGACCGCTTTGAAGACATCATCGCCGTGCTGGCCCTCTAC
CGGCCGGGTCCGCTGGGCTCGGGCATGGTGGACGACTTCATCCTGCGCAAGGCCGGCAAGCAGGAAGTGGACTACTTCCA
CCCCGACCTGACCGCCTGTCTCGATCCGACCTACGGCGTGATCGTGTACCAGGAACAGGTGATGCAGATTTCGCAGATCA
TCGGCGGCTACACGCTGGGTGGTGCCGACATGCTGCGCCGCGCCATGGGCAAGAAAAAGCCCGAGGAAATGGCCAAGCAC
CGTGGCATTTTCTGTGAAGGCGCCGAGAAAAAAGGCTACCCGAAAGCACTGGCCGAGCATCTTTTTGACCTGATGGCCAA
GTTCGCCGAGTACGGCTTCAACAAGTCGCACACGGCTGCCTACGCGGTGGTGAGCTACCAGACTGCCTGGCTCAAGGCAC
ACTACCCGTCGGCCTTCATGGCCGCCACCATGTCGTCGGAACTCGACAACACCGACCAGCTGCGGGTGTTCTACGACGAC
AGCCTCGCCAACCAGCTGGAATTCCTGCCGCCGGACATCAACGAAAGCGTCTACCGTTTCGTGCCGGTCGACGCCAGACG
CATCCGTTATGCACTGGGCGCCATCAAGGGTACCGGGCAGGCTGCCGTCGAACATATCGAGGCCGTGCGCAAGGAAGGCG
GCCGGTTTACCGACCTGTTCGATTTCTGCCGCCGCACCGACAAACGCATCGTCAACCGCCGCACCATCGAAGCCCTGATC
CGTGCCGGCGCATTCGATACGCTGGAACCCAACCGTGCCCGCCTGATCGCCAACGTCGAACTGGCCATGACCATGGCCGA
GCAGGAAGCGCAGAACGCCAACCAGGGCGGGCTGTTCGACCTGCTGGACACCAGCGCGGCACCCGCAGTGGAAATGATGC
AGGTCCGTCCGTGGGACGAAGCCACCCGCCTGACCGAAGAAAAAACCGCCATCGGCTTTTTCCTGTCCGGCCACCCGTTC
CACGCCCACGCCGACACCGTGCGCCGGCTGGTCAAGACGCCGCTCAACCGGATCGCTCCGAAAAAGGAACCGCAATGGCT
GGCCGGCACCATCATGGGCGTGCGGACCAAGGTCGGCAATCGCGGCAAGATGGCCTTCGTGCAGCTGGACGACGGCACGG
CCAAGCTGGAAGTGTCGTTCTTCAGCGAATCCTTCGATGCGGCCCGCCACAAGCTCAAGGAAGACAGCATCCTCATCGTC
GAAGGCAAGGTCAGCCAGGATGACTATTCCGGCGGGTTGCGCATCATCGCCGACCAGGCGCTGGACCTGTCCGAAGCCCG
TGCCCGCTTCGCCCGCTACCTGAGGCTGGCGACCCCGGCCGCCCAGCTGGATGCACCGCGCCTGAAAGCCCTGCTCGAGC
CTTTCCGCTCTGCCGAAGGCTGCCCGGTGCGGCTGGATTACTGCAATGCCGCCGCCCGCTGCCAGCTCGAGCTTGACGAC
AGCTGGCGGGTACGGCCGGATGACGCCTTGCTGGCCTCCCTGCGCAGCTGGCAGGGCGAGCACAGCGTCACCATCGTGTT
CTGA

Upstream 100 bases:

>100_bases
AATGCAAAAAGCCGGACTGGCCAGCCTCAAGCCCCGGCAGGAAGACTGACCGGGACAAATGGTCCGGTTACAGCCGGTGA
CAGCCATGTAAAATGCGCGG

Downstream 100 bases:

>100_bases
CCCGGTACGAGAGGCCGGCCCTGCTGCCGGCTTCGCTGCTCCTGCGGCCCGGAGCGCCATCCGGCACCGGGCATGATTCC
TGCCCAGGCAACTTCCTTTT

Product: DNA-directed DNA polymerase III, alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1147_residues
MNTPRFIHLRLHSEFSVTDGITRIGDAVKRAALERMPALGLSDLMNLFGMVKFYKACLGKGVKPIVAVDAWLENPADRDQ
PSRCLLIAMNTAGYHRLSELLTDAYRLNQYRGRAELQREWLTREACENLIFVSGAQHGDTGQALLAGNLELAQALARDWA
QRFPGRCYLEIQRTGKPEADTCTERMLWLAGETGLPVVATHPVQFLDRDDFMAHEARVCIAEGEMLGNPKRVRHYTEEQY
FKSTDEMAALFADVPEALENSVEIARRCNIEILLGKNFLPDFPTPDGLSLDDYLIKRSEEGLVERMQALYPDAGQREAEM
PRYRERLKFELDTIIQMGFPGYFLIVADFINWAKANGCPVGPGRGSGAGSLVAFSIGITDINPLDYALLFERFLNPERVS
MPDFDIDFCQDNRWRVIEYVRERYGADAVSQIATFGTMAAKAVVRDVGRVLDLPYSFCDGLSKLIPAAPGKQYSLDDAVE
MEPILKERLEKEEEVSQLWALAKKLEGLTRNIGMHAGGVLIAPGKITDFCPMYQASGDDASPVSMLDKGDVEDVGLVKFD
FLGLRNLTIIDLAVNYIKALDPAFDLDLNHMPFTDPAAYRVLQQANTTAVFQLESEGMKKLLEKLKPDRFEDIIAVLALY
RPGPLGSGMVDDFILRKAGKQEVDYFHPDLTACLDPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKPEEMAKH
RGIFCEGAEKKGYPKALAEHLFDLMAKFAEYGFNKSHTAAYAVVSYQTAWLKAHYPSAFMAATMSSELDNTDQLRVFYDD
SLANQLEFLPPDINESVYRFVPVDARRIRYALGAIKGTGQAAVEHIEAVRKEGGRFTDLFDFCRRTDKRIVNRRTIEALI
RAGAFDTLEPNRARLIANVELAMTMAEQEAQNANQGGLFDLLDTSAAPAVEMMQVRPWDEATRLTEEKTAIGFFLSGHPF
HAHADTVRRLVKTPLNRIAPKKEPQWLAGTIMGVRTKVGNRGKMAFVQLDDGTAKLEVSFFSESFDAARHKLKEDSILIV
EGKVSQDDYSGGLRIIADQALDLSEARARFARYLRLATPAAQLDAPRLKALLEPFRSAEGCPVRLDYCNAAARCQLELDD
SWRVRPDDALLASLRSWQGEHSVTIVF

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA