Definition Laribacter hongkongensis HLHK9, complete genome.
Accession NC_012559
Length 3,169,329

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 226939985

GI number:

Start: 1020973

End: 1022823

Strand: Reverse

Name: Not Available

Synonym: LHK_01057

Alternate gene names: NA

Gene position: NA

Preceding gene: 226939986

Following gene: 226939984

Centisome position: NA

GC content: NA

Gene sequence:

>1851_bases
ATGCATCACTCCCGTCTGCTGCCGTTTTCCCCGCTCCTGCTGGTCCTGCTGACCGGTTGCCAGACTCCGCCGCGCGTCAT
GCCCTCCCCCCAGCATCTGGGGCAGTCCGACAGTCCGCCGGCCGGCAGCATCCCGGCTCCGGTGCCATTGCCGGTGCCTG
ACCAGGCCACTGTGGCAGCACCGGTCTACAGCATCATCATCAGCCGGTCGGCACCGGTCCGTGAGCTGCTCGCCTCCATC
GCCAAGGATGCGCGCATCAATCTCGACATCCATCCGCAGATCAGCGGCCTCGTCACGCTCAACGCCATCCGGCAGACCCT
GCCGCAGATTCTCGACCGGCTGGCCCGCCAGGTGTCACTGCGCTGGAAACTGGAGCACGGTACCCTGATCGTTGAACCGG
ACGAGCCCTACCTGCAGGAATACACCCTCGACTACGTCAACATCAGCCGCGTCACCAAGACCGAAATCGACGTCAACTCC
GGTCTTGCCAGCGTCGGTGGCAACAATGCCGCCGCCAGCAACGGTTCGTCCTCCAAGATCACCACCGAATCCAGCAACGG
TTTCTGGACCACGCTGCAGAAAAACATCGAGGAAATGCTGCGCGACAAGGAAAAGATCGTGGTCACCACCCAGAACGGCC
TGCCGGCCATGCCCCGACCGGCCGGGAGCAAACCGGCGGCCGGTAGCAGCGGAAGCATGCTGGACCTGATGGCCGGGCTC
AACCCGGTCTGGCAAGGGGGAGCCGCAACTCCGGCCATTCCCGTACCGGCCTCGACCCAGCGGACCGAAACCGATCCGGT
CCGCAACGTCATGGTCAACCCGGAAACCGGCGTGCTGGTCGTGCGCGGCACCCAGCGCCAGCAAAAGCAGGTGCAGTCCT
ATCTGGCACAGGTCCGCAATGCCAGCCTGCGCCAGGTCATGATCGAAGCCACCATCGCCGAAGTCGAACTGACGCGTGAC
TATCAGGCCGGTGTCGACTGGAGCCGCATCGGAGACGGCAAGAACTGGCAGTTCGCCAGCAATTTTTCCGGCAACGGCCT
CTCACAGAATGCCGGCAACCCGGCACAGTATTTCGGCACGGTCGGCCAGGTCCTTCAGGGGTCCACCACACCGGCCTTTA
CCGGCCTTTACCGCAGCGGCAGCCTCTCGGCCGCCATCCGCCTGCTGGAAGGCTTTGGCCGTACCCGTGTCCTGTCGAGC
CCCAAGCTGATGGCACTCAACAACCAGTCCGCCATCCTGAAAGTGGTCGACAACGTTCCCTACTTCACCCTCAAGATCAA
GTACGAACCGGGTACCACCACCAACCCGCCGACCACCACCTACGAAAGCGAGCTGCACAGCGTCCCGGTCGGCATCGTGA
TGAACATCACGCCACAAATCGCCCCGGACGGCCGGGTTTCGCTCAACGTGCGCCCGACCATCACCAACATCACCGGCTTC
CAGCGGGACCCGGCCGTACAGCTGGTACTGGCCGACAAGGGCGCCAGTGATCCCGGCCTGGGCCTGGTGCCGCAATTACA
GGTGCGCGAGCTGGAATCCACCCTGCGCCTGCAAAGCGGCGAGATCGGCGTGCTGGGCGGGCTGATCCAGGACAAGATCG
ACAAGGACAGCAACGGCATCCCCCTCCTGTCCCAGCTGCCGGTCGTGGGCGCCCTGTTCGGCCTGCGCAAGGAAAGCGCA
CGCAAGACCGAACTGGTGGTTTTCCTCAAGCCGACACTGGTCAGCCAGCCTTCGCTCACGACAGATCTGTCTGCCCTGCG
CAATGCTTTGCCCGACAGCCGCTTTCTTGATGGCCGGCAGGATTTCCGCCAGATAGGCGGTGTCCTATCCTACGAGGGGA
ACTACCAGTGA

Upstream 100 bases:

>100_bases
CCGCCGCCACGTTCTGCAAGCCCTTGCCGATGCCCCTTTCGTGACTCCGCGCGGCTGGCTGGCCCGGCTGGCGGGATACC
CTTACCGGATTGCCTGAGCC

Downstream 100 bases:

>100_bases
GTGTCCTGCTCGAAGCCCTCAAACGTGCCGAAACCGCCCGGCAGTCCGGTCTGGTCCAGGAGACCATTCCCCGACCTGCT
CCGGCACCAGCGGCCACACC

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>616_residues
MHHSRLLPFSPLLLVLLTGCQTPPRVMPSPQHLGQSDSPPAGSIPAPVPLPVPDQATVAAPVYSIIISRSAPVRELLASI
AKDARINLDIHPQISGLVTLNAIRQTLPQILDRLARQVSLRWKLEHGTLIVEPDEPYLQEYTLDYVNISRVTKTEIDVNS
GLASVGGNNAAASNGSSSKITTESSNGFWTTLQKNIEEMLRDKEKIVVTTQNGLPAMPRPAGSKPAAGSSGSMLDLMAGL
NPVWQGGAATPAIPVPASTQRTETDPVRNVMVNPETGVLVVRGTQRQQKQVQSYLAQVRNASLRQVMIEATIAEVELTRD
YQAGVDWSRIGDGKNWQFASNFSGNGLSQNAGNPAQYFGTVGQVLQGSTTPAFTGLYRSGSLSAAIRLLEGFGRTRVLSS
PKLMALNNQSAILKVVDNVPYFTLKIKYEPGTTTNPPTTTYESELHSVPVGIVMNITPQIAPDGRVSLNVRPTITNITGF
QRDPAVQLVLADKGASDPGLGLVPQLQVRELESTLRLQSGEIGVLGGLIQDKIDKDSNGIPLLSQLPVVGALFGLRKESA
RKTELVVFLKPTLVSQPSLTTDLSALRNALPDSRFLDGRQDFRQIGGVLSYEGNYQ

Sequences:
NA

Specific function: NA

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA