Definition Laribacter hongkongensis HLHK9, complete genome.
Accession NC_012559
Length 3,169,329

Click here to switch to the map view.

The map label for this gene is mfd

Identifier: 226939558

GI number:

Start: 593766

End: 597161

Strand: Reverse

Name: mfd

Synonym: LHK_00629

Alternate gene names: NA

Gene position: NA

Preceding gene: 226939559

Following gene: 226939557

Centisome position: NA

GC content: NA

Gene sequence:

>3396_bases
ATGATTCCCGAACTGCCCCGCCCCGCTTCCCGTCTTGCCCTCGGCGCCTTGCCGCGCGGAGCTGACAGCGCCCGCCTGGC
GGCCCTGGCGCGTGCCAGCCGCCAGCCGCTGGTGATCCTGACCGCCGACCCGCAGGCCGCCCGCCGCATCGCCGACGAAC
TGCCGTTTTTCGACCCGGAACTGGAAGTGGCGTTTTTCCCCGACTGGGAAACCCTGCCCTACGACCAGCTGTCGCCCCAC
GCCGACCTGGTCAGCGAGCGGCTGGCCACGCTGTGGAAGCTGCGCCAGGGCAAGGCCGACGTGATCGTCACCGCCGTCCC
GACCGCCATGGGCCGGCTGGCGCCGGTGGAATTCCTGGCCGGGCGCACCTTCCTGCTCAAGGCCGGCGACCGGCTGGATG
CCGACCAGCTGCGCGCCGACCTGGCACTGGCGGGCTACACCCACGTCACGCAGGTGTATGCCCCGGGCGAGTTTTCCGTG
CGCGGCGGCCTGATCGACCTGTTTCCGTCCGGCGCCGCCCTGCCTTACCGCATCGAGCTGTTCGACGACGAAATCGACAC
CCTGCGCACGTTTGACGTCGACACCCAGCGCACCCTCTATCCGGTCAATGACGTGCGCCTGCTGCCGGCGCGCGAATTTC
CCACCGACGAGGGCGGCGTCACGGCCTTCCGCCAGCATTTCCGCGAAACGTTCGAGGGCGATCCGTCGCGGCGGCAGCTC
TACAAGGACATTTCCGCCGGCAGCATCCCCGCCGGCATCGAATACTATCTGCCGCTGTTTTTCGACCATACCGCCACGTT
TTTCGACTACGTGGGCGAGCAGGCCCTGATCGCCCTGCACCACGACACCCTGGCGGCGGCCGAAACCTTCTGGCGCGAAG
TCGAACAGCGCCGCACCATGCTCGGCACCGATCCGGCCCGCCCGCTGCTGCCGCCGGCCACGCTTTACCTGCGTCCGGAC
GAACTGATGGCGGCCCTCAAGCCGTACGCCCGCTGCGAAATCGCTGCCGGCGGAGCATTGCCGGACGACCTGGCGCGCCT
GCCCGACCTGACGGTCGACCGGCGGGCCGAGGTGCCGGTTGCCCGGCTCAAGGCCTTCCTCGCCACGACACCGGCCCGCA
CCCTGCTGGTGGCCGAAAGCCTCGGCCGGCGCGAAACGCTGACCCAGTTCCTGGGCGAATACGGGCTCAAGCCGCAGCCG
GTCGATTCGCTGACCGGCTTCAGCCAGGGTGACATGCGCTTTGCCCTGACTGTCGGCACGCTGACCGGCGGCTTTGTCGA
CCTTGAGCGCCAGGAGGCGCTGCTGAGCGAGGCCGACCTCTACCAGACCGTGGCGCGCACGCCGCGCCAGCAGAAAAAGC
GCAGCAACACCGACGCCATGCTGCGCGACCTCGCCGAGGTCAAGGTCGGTGATCCGGTCGTGCACGAGGCGCACGGCATC
GGCCGCTATCTGGGGCTGGTATCGATGGATCTGGGCGAAGGCCAGACCGAGATGATGCAGCTTGAATACGCGGACGGCGC
CACCCTCTACGTGCCGGTCAGCCAGCTGCACCTGATTTCGCGTTATGCCGGCCACGCCTCCGACAGCGTGCAGCTGACCC
GGCTGGGCTCGCCGCAATGGGAACGGGCCAAGCAGCGCGCAGCGCAAAAGGCGCGTGACACGGCAGCCGAGCTCCTGAAC
CTCTATGCCCGGCGCGCGGCGCGTGAAGGCCATGCCTTCGAACTGTCGGCCCACGATTACGAGGCCTTTGCCGCCGGCTT
CGGTTTCGAGGAAACCCCGGACCAGCAGGCCGCCATCGAGGCGGTGATCCACGACATGACCGCCGGCCGGCCGATGGACC
GGCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAAGTGGCGCTACGGGCGGCCTTTGTCGCCGCCATGGGCGGCAAG
CAGGTGGCCGTGCTGGTGCCCACCACCCTGCTGGCCGAGCAGCATTACCAGAACTTTGCCGACCGCTTTGCCGACTGGCC
GCTGAAGATTGTCGAGCTGTCGCGCTTCCGCTCGGCCAAGGAGCAAAAGGCCGCGCTGGCCGGCCTTGCCGACGGCAGTG
TCGACATCGTCATCGGCACGCACCGGCTGGTGCAGCCGGATGTCGAATTCGCCCGTCTCGGTCTGGTGATCATCGACGAG
GAACACCGCTTCGGCGTGCGGCAGAAAGAACAGCTCAAGCGCCTGCGCGCCAATGTCGATGTGCTGACGCTGACCGCCAC
GCCGATTCCGCGCACGCTGGCCATGTCACTGGAAGGCCTGCGTGACTTTTCGGTCATCGCCACGGCGCCCAACCGCCGGT
TGTCGGTCAAGACCTTTGTCACGCCGCAAAACAACGGGGTGATCCGCGAGGCGGTGCTGCGCGAACTCAAGCGTGGCGGT
CAGGTGTTCTTCCTCTACAACGAGGTGGAAACCATTGAGAACATGCGCGAAAAGCTCACGGAGCTGCTGCCGGAAGCACG
GGTGCAGGTGGCGCACGGCCAGATGCGCGAGCGTGAGCTGGAACAGGTGATGCGTGATTTCAACCAGCAGCGCTTCAACG
TGCTGCTGTGTTCCACCATCATCGAAACCGGCATCGACATCCCCAACGCCAACACCATCATCATCCACCGCGCCGACCGT
TTCGGCCTGGCACAACTGCACCAGTTGCGCGGCCGGGTCGGCCGCAGCCACCACCAGGCGTATGCCTATCTGCTGACCGG
CGAAGGCATGACCAAGGACGCCATGAAGCGGCTGGAAGCAATCCAGATGATGGAAGACCTCGGCAGCGGCTTTTACCTCG
CCATGCACGACCTGGAAATCCGCGGTGCGGGCGAGGTGCTGGGCGAAGGCCAGTCGGGCGAAATGCACGAAATCGGTTTC
TCGCTCTACACCGAGATGCTCAAGAGCGCGGTACGGGCGCTCAAGAAAGGTCAGGAACCCGATCTTGATGCGCCGCTGGG
CGTCACCACCGAAGTCAATCTGCACGCCCCGGCCCTGCTGCCGGACAGCTACTGCCCGGACGTGCACGAACGGCTGGTGC
TTTACAAACGGCTGGCAAGCTGCGAAACCGAGGGCGAAATCGACGCCATCCACGAGGAGCTGATCGACCGCTTCGGCCTG
CCGGACGTGCCGGTGAAGACGCTGATCGACAGCCACCGGCTGCGCCTTGCGGCCCGCAGCCTCGGCATCGACAAGATCGA
TGCCTCGGACAGCGCGGTGCAGCTGACCTTCTCGCGCCAGACTCCGGTCGAGCCGGTGCGCATCATCCAGCTGGTGCAGG
GCAAGCGCAATTATCGCCTGGTCGGGCAGGACAAGCTGCGGGTGGAAGTGGCGCTGGCCGAACCGGCGATGCGTACGGCC
CGGGTCAGGGAGCTATTGAAAGAGCTGGCCGGCTGA

Upstream 100 bases:

>100_bases
ACTGGCTGGAACAGCAGCAGGGCGGCGGCACGCCGCCGGAACACATCGCCCCGCCACTGCCGCTCCCACCCACTCCTACC
GAACAGCCCCGGTCTTAGCC

Downstream 100 bases:

>100_bases
CCATCCGGGTTGCCCGCCAGCGATGCCGACACGATAATCCCCTTGTCCCGTCATTGCCGGTTCGTTGACTTATGCTCATG
CAAGAATCCAAACTGTCCAT

Product: Mfd

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1131_residues
MIPELPRPASRLALGALPRGADSARLAALARASRQPLVILTADPQAARRIADELPFFDPELEVAFFPDWETLPYDQLSPH
ADLVSERLATLWKLRQGKADVIVTAVPTAMGRLAPVEFLAGRTFLLKAGDRLDADQLRADLALAGYTHVTQVYAPGEFSV
RGGLIDLFPSGAALPYRIELFDDEIDTLRTFDVDTQRTLYPVNDVRLLPAREFPTDEGGVTAFRQHFRETFEGDPSRRQL
YKDISAGSIPAGIEYYLPLFFDHTATFFDYVGEQALIALHHDTLAAAETFWREVEQRRTMLGTDPARPLLPPATLYLRPD
ELMAALKPYARCEIAAGGALPDDLARLPDLTVDRRAEVPVARLKAFLATTPARTLLVAESLGRRETLTQFLGEYGLKPQP
VDSLTGFSQGDMRFALTVGTLTGGFVDLERQEALLSEADLYQTVARTPRQQKKRSNTDAMLRDLAEVKVGDPVVHEAHGI
GRYLGLVSMDLGEGQTEMMQLEYADGATLYVPVSQLHLISRYAGHASDSVQLTRLGSPQWERAKQRAAQKARDTAAELLN
LYARRAAREGHAFELSAHDYEAFAAGFGFEETPDQQAAIEAVIHDMTAGRPMDRLVCGDVGFGKTEVALRAAFVAAMGGK
QVAVLVPTTLLAEQHYQNFADRFADWPLKIVELSRFRSAKEQKAALAGLADGSVDIVIGTHRLVQPDVEFARLGLVIIDE
EHRFGVRQKEQLKRLRANVDVLTLTATPIPRTLAMSLEGLRDFSVIATAPNRRLSVKTFVTPQNNGVIREAVLRELKRGG
QVFFLYNEVETIENMREKLTELLPEARVQVAHGQMRERELEQVMRDFNQQRFNVLLCSTIIETGIDIPNANTIIIHRADR
FGLAQLHQLRGRVGRSHHQAYAYLLTGEGMTKDAMKRLEAIQMMEDLGSGFYLAMHDLEIRGAGEVLGEGQSGEMHEIGF
SLYTEMLKSAVRALKKGQEPDLDAPLGVTTEVNLHAPALLPDSYCPDVHERLVLYKRLASCETEGEIDAIHEELIDRFGL
PDVPVKTLIDSHRLRLAARSLGIDKIDASDSAVQLTFSRQTPVEPVRIIQLVQGKRNYRLVGQDKLRVEVALAEPAMRTA
RVRELLKELAG

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA