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The map label for this gene is alc1 [H]

Identifier: 226830771

GI number: 226830771

Start: 2388664

End: 2389818

Strand: Reverse

Name: alc1 [H]

Synonym: BURPS1106A_2430

Alternate gene names: 226830771

Gene position: 2389818-2388664 (Counterclockwise)

Preceding gene: 126454520

Following gene: 126453721

Centisome position: 59.92

GC content: 67.97

Gene sequence:

>1155_bases
ATGCGCGGCGCGGCGGGTTCGCCGCGACGGCATCCGCTGCGGCGCGCCAGACGCGCCGCCTCGGTCGCCCGAGCCGCGCG
AGACGGCGCGCGGCGGCGTTCCACTCATCAGGCATCACGCACTTACGACAAGGACAAGACGATGGCTTTTCCGCTTTCGG
ATCCGAACGCTCCCGAATTCACGCGGCGTTACGTGAATCTCGCCGATCCGCGTCTCGGCGCGCAGGCGCTCGAGGCGAGC
GACGATTTCTTCGCGCCGAAGGAGCGCATGCTGAATCCGGAGCCCGCGGTGTTCATCCCGGGCAAATACGACGATCACGG
CAAATGGATGGACGGCTGGGAGACGCGCCGCAAGCGCACGACGGGTTATGACTGGTGCGTCGTGAAGCTCGCGCGTCCGG
GCGTGATCAAGGGTGTCGACATCGATACGAGCCATTTCACCGGCAATTTCCCGCCCGCCGCGTCGATCGAGGCCGCGCAC
GTGCCCGACGGCGCGCCGAACGAGGCGACGAAGTGGGTGGAGATCGTGCCGGCGACGACGCTGCAGGGCAACAGCCATCA
CTACGTCGAAGCACGCGACGCGAACGCATACACGCATCTGCGCGTGAACCTCTACCCGGACGGCGGCATCGCGCGGCTGC
GCGTCTACGGCCAGCCGCAGCTCGATTGGGCGGGCGCGAGCCGATCGGCGCTGTTCGATCTCGCGGCGATGGAGAACGGC
GGCTACGTCGTCGCGGCGAACAACCAGCACTTCGGCCTCGCGTCGAACGTGCTGCTGCCGGGCCGCGGCGTGAACATGGG
CGACGGCTGGGAGACGCGCCGCCGCCGCGAGCCGGGCAACGACTGGGCGATCGTCGCGCTCGCGCAGCCGGGCGTGATCC
GCAAGGTCGAAATCGACACCGCGCATTTCAAGGGCAACTATCCGGACCGCTGTTCGATCCAGGCCGCCTATGTGCAGGGC
GGCACCGACAGCTCGCTCGTCACGCAGGCGATGTTCTGGCCGGTGCTGCTCGGCGAGCAGAAGCTGCAGATGGACAAGCA
GCACGCTTTCGAAGCCGAGCTCGCCGCGCTCGGGCCCGTCACGCACGTGCGGCTGAACATCATTCCGGACGGCGGCGTAT
CGCGTCTGCGCGTATGGGGCACGCTCGACAAATGA

Upstream 100 bases:

>100_bases
GATCGGCGCGTGAGCGTCGGCTGAACGCTTCGGCGGCTCGGCGCGGAGCAGGGTTGCGCCGCGATCGATCCGTGCCGGCG
AAGCGAAAACGAATCCGGCG

Downstream 100 bases:

>100_bases
AGACGCTCTCGATCGAACCGCTGACGCGCGCCGCCTTCGCGCCGTTCGGCGACGTCATCGAAACGCAAGGCGCGAAGCAG
ATTCCGATCAACCTCGGCAC

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 1 [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MRGAAGSPRRHPLRRARRAASVARAARDGARRRSTHQASRTYDKDKTMAFPLSDPNAPEFTRRYVNLADPRLGAQALEAS
DDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCVVKLARPGVIKGVDIDTSHFTGNFPPAASIEAAH
VPDGAPNEATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPDGGIARLRVYGQPQLDWAGASRSALFDLAAMENG
GYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVALAQPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQG
GTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPVTHVRLNIIPDGGVSRLRVWGTLDK

Sequences:

>Translated_384_residues
MRGAAGSPRRHPLRRARRAASVARAARDGARRRSTHQASRTYDKDKTMAFPLSDPNAPEFTRRYVNLADPRLGAQALEAS
DDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCVVKLARPGVIKGVDIDTSHFTGNFPPAASIEAAH
VPDGAPNEATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPDGGIARLRVYGQPQLDWAGASRSALFDLAAMENG
GYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVALAQPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQG
GTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPVTHVRLNIIPDGGVSRLRVWGTLDK
>Mature_384_residues
MRGAAGSPRRHPLRRARRAASVARAARDGARRRSTHQASRTYDKDKTMAFPLSDPNAPEFTRRYVNLADPRLGAQALEAS
DDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGYDWCVVKLARPGVIKGVDIDTSHFTGNFPPAASIEAAH
VPDGAPNEATKWVEIVPATTLQGNSHHYVEARDANAYTHLRVNLYPDGGIARLRVYGQPQLDWAGASRSALFDLAAMENG
GYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVALAQPGVIRKVEIDTAHFKGNYPDRCSIQAAYVQG
GTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPVTHVRLNIIPDGGVSRLRVWGTLDK

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=365, Percent_Identity=38.0821917808219, Blast_Score=253, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6322220, Length=328, Percent_Identity=38.4146341463415, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 42378; Mature: 42378

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGAAGSPRRHPLRRARRAASVARAARDGARRRSTHQASRTYDKDKTMAFPLSDPNAPEF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH
TRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRT
HHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCC
TGYDWCVVKLARPGVIKGVDIDTSHFTGNFPPAASIEAAHVPDGAPNEATKWVEIVPATT
CCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECEE
LQGNSHHYVEARDANAYTHLRVNLYPDGGIARLRVYGQPQLDWAGASRSALFDLAAMENG
ECCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHEEEEEEECCC
GYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVALAQPGVIRKVEIDT
CEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCEEEEEEEEE
AHFKGNYPDRCSIQAAYVQGGTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPV
EEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCE
THVRLNIIPDGGVSRLRVWGTLDK
EEEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure
MRGAAGSPRRHPLRRARRAASVARAARDGARRRSTHQASRTYDKDKTMAFPLSDPNAPEF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH
TRRYVNLADPRLGAQALEASDDFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRT
HHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCC
TGYDWCVVKLARPGVIKGVDIDTSHFTGNFPPAASIEAAHVPDGAPNEATKWVEIVPATT
CCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECEE
LQGNSHHYVEARDANAYTHLRVNLYPDGGIARLRVYGQPQLDWAGASRSALFDLAAMENG
ECCCCCEEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHEEEEEEECCC
GYVVAANNQHFGLASNVLLPGRGVNMGDGWETRRRREPGNDWAIVALAQPGVIRKVEIDT
CEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCEEEEEEEEE
AHFKGNYPDRCSIQAAYVQGGTDSSLVTQAMFWPVLLGEQKLQMDKQHAFEAELAALGPV
EEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCE
THVRLNIIPDGGVSRLRVWGTLDK
EEEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA